RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 A0A1B0GUH1 482 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 PABPN1LA6NDY0 278 aaKnown RBP12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 H0YIG0 161 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 H7BY64 318 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 I3L1I5 382 aaPredicted RBP12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 LRRTM2O43300 516 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 KIF5CO60282 957 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 CYC1P08574 325 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 RNF224P0DH78 156 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 COX6A1P12074 109 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 CCND1P24385 295 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 GRK3P35626 688 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 COILP38432 576 aaPredicted RBP12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 RPS15AP62244 130 aaKnown RBP12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 CUL1Q13616 776 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 INAQ16352 499 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 ABHD17BQ5VST6 288 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 FAAH2Q6GMR7 532 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 TTC27Q6P3X3 843 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 SLC34A3Q8N130 599 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 RASGEF1CQ8N431 466 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 AMER3Q8N944 861 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 PPFIBP2Q8ND30 876 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 CATSPER1Q8NEC5 780 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 BRIX1Q8TDN6 353 aaKnown RBP12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 MAGEB10Q96LZ2 347 aaPredicted RBP12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 CCDC138Q96M89 665 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 PRAP1Q96NZ9 151 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 GPR21Q99679 349 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 TUBB6Q9BUF5 446 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 ZNF700Q9H0M5 742 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 CCDC177Q9NQR7 707 aaPredicted RBP12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 TAS2R13Q9NYV9 303 aa12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 TRMT6Q9UJA5 497 aaKnown RBP12.92□□□□□ -0.34
SNRPA1-204ENST00000558020 LOC102723996A0A087X1L8 192 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 PGRMC1O00264 195 aaKnown RBP12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 FOXS1O43638 330 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 HAUS5O94927 633 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 TTC4O95801 387 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 CRYABP02511 175 aaKnown RBP12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 C8GP07360 202 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 HIST1H2AGP0C0S8 130 aaPredicted RBP12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 C8orf89P0DMQ9 161 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 HIST1H2ADP20671 130 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 SLC1A2P43004 574 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 TNFSF10P50591 281 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 EEF1A2Q05639 463 aaKnown RBP12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 CYP1B1Q16678 543 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 HSP90AA5PQ58FG0 334 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 ZNF549Q6P9A3 640 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 CYHR1Q6ZMK1 362 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 PPIL6Q8IXY8 311 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 CAMKVQ8NCB2 501 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 PSMF1Q92530 271 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 HIST1H2AHQ96KK5 128 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 SLC30A3Q99726 388 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 HIST1H2AJQ99878 128 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 TRIM56Q9BRZ2 755 aaKnown RBP12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 NAT9Q9BTE0 207 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 H2AFJQ9BTM1 129 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 PARVBQ9HBI1 364 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 STMN3Q9NZ72 180 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 C19orf25Q9UFG5 118 aaPredicted RBP12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 POLEQ07864 2286 aa12.91□□□□□ -0.34
SNRPA1-204ENST00000558020 CRYBG3Q68DQ2 2970 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 CELSR2Q9HCU4 2923 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 HAT1O14929 419 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 JRKO75564 520 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 CLDN1O95832 211 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 IMPA1P29218 277 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 MAGEA3P43357 314 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 PPP1R7Q15435 360 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 MFSD4BQ5TF39 518 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 TMEM205Q6UW68 189 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 PCGF5Q86SE9 256 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 C17orf64Q86WR6 236 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 LURAP1LQ8IV03 231 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 CPNE9Q8IYJ1 553 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 MYO1HQ8N1T3 1032 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 TBC1D19Q8N5T2 526 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 SIRT6Q8N6T7 355 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 DNAJB8Q8NHS0 232 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 GIMAP7Q8NHV1 300 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 CD200R1Q8TD46 325 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 MS4A14Q96JA4 679 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 SIGLEC10Q96LC7 697 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 CYTH2Q99418 400 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 SLX1AQ9BQ83 275 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 AARSD1Q9BTE6 412 aaKnown RBP12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 TRIM54Q9BYV2 358 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 RNF32Q9H0A6 362 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 ANKHQ9HCJ1 492 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 PLA2G3Q9NZ20 509 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 MED16Q9Y2X0 877 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 HEATR5BQ9P2D3 2071 aa12.9□□□□□ -0.34
SNRPA1-204ENST00000558020 ITPR2Q14571 2701 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 FFAR3O14843 346 aa12.89□□□□□ -0.35
SNRPA1-204ENST00000558020 SLC16A5O15375 505 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms