RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 MMP11P24347 488 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 IVDP26440 423 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 ELK3P41970 407 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 CCL11P51671 97 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 ITGA8P53708 1063 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 VSX2P58304 361 aaPredicted RBP10.9□□□□□ -0.66
LINC00648-204ENST00000557749 RPS15AP62244 130 aaKnown RBP10.9□□□□□ -0.66
LINC00648-204ENST00000557749 TAP2Q03519 686 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 TLE1Q04724 770 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 CKAP4Q07065 602 aaKnown RBP10.9□□□□□ -0.66
LINC00648-204ENST00000557749 MGAT5Q09328 741 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 AIMP2Q13155 320 aaKnown RBP10.9□□□□□ -0.66
LINC00648-204ENST00000557749 CUL1Q13616 776 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 CCSMST1Q4G0I0 132 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 WASHC2DQ5SRD0 308 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 VWA5B1Q5TIE3 1220 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 PRAMEF13Q5VWM6 474 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 ADCK2Q7Z695 626 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 PTRH1Q86Y79 214 aaKnown RBP10.9□□□□□ -0.66
LINC00648-204ENST00000557749 CSNK1A1LQ8N752 337 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 GIMAP7Q8NHV1 300 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 ZNF480Q8WV37 535 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 RNF31Q96EP0 1072 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 CFAP36Q96G28 342 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 CABS1Q96KC9 395 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 RUFY1Q96T51 708 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 NRTNQ99748 197 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 TRIM56Q9BRZ2 755 aaKnown RBP10.9□□□□□ -0.66
LINC00648-204ENST00000557749 ACAT2Q9BWD1 397 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 ZNF304Q9HCX3 659 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 MLXIPLQ9NP71 852 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 TMEM184CQ9NVA4 438 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 ZNF282Q9UDV7 671 aaPredicted RBP10.9□□□□□ -0.66
LINC00648-204ENST00000557749 CIDEBQ9UHD4 219 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 TAC3Q9UHF0 121 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 CHMP2BQ9UQN3 213 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 MED16Q9Y2X0 877 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 UTP11Q9Y3A2 253 aaKnown RBP10.9□□□□□ -0.66
LINC00648-204ENST00000557749 TEX264Q9Y6I9 313 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 CFAP46Q8IYW2 2715 aa10.9□□□□□ -0.66
LINC00648-204ENST00000557749 SNRNP200O75643 2136 aaKnown RBP10.9□□□□□ -0.67
LINC00648-204ENST00000557749 A0A0J9YVX5 310 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 SHISA8B8ZZ34 492 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 E7ESA3 106 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 AGPSO00116 658 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 CTSVO60911 334 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 EIF2S1P05198 315 aaKnown RBP10.89□□□□□ -0.67
LINC00648-204ENST00000557749 GSTA2P09210 222 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 FBLP22087 321 aaKnown RBP10.89□□□□□ -0.67
LINC00648-204ENST00000557749 MCM3P25205 808 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 PSMB5P28074 263 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 SOX8P57073 446 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 ETF1P62495 437 aaKnown RBP10.89□□□□□ -0.67
LINC00648-204ENST00000557749 PDIA2Q13087 525 aaKnown RBP10.89□□□□□ -0.67
LINC00648-204ENST00000557749 ATP1A4Q13733 1029 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 FAM53BQ14153 422 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 DCAF10Q5QP82 559 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 TEDDM1Q5T9Z0 273 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 ZNF425Q6IV72 752 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 LCN10Q6JVE6 187 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 CAPN13Q6MZZ7 669 aaPredicted RBP10.89□□□□□ -0.67
LINC00648-204ENST00000557749 CEP128Q6ZU80 1094 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 PIWIL4Q7Z3Z4 852 aaKnown RBP10.89□□□□□ -0.67
LINC00648-204ENST00000557749 SYT9Q86SS6 491 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 PAQR7Q86WK9 346 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 C17orf64Q86WR6 236 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 AGGF1Q8N302 714 aaeCLIP10.89□□□□□ -0.67
LINC00648-204ENST00000557749 NKAPQ8N5F7 415 aaKnown RBP10.89□□□□□ -0.67
LINC00648-204ENST00000557749 PYROXD1Q8WU10 500 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 LINGO1Q96FE5 620 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 PDLIM5Q96HC4 596 aaKnown RBP10.89□□□□□ -0.67
LINC00648-204ENST00000557749 KRT12Q99456 494 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 NDNQ99608 321 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 POPDC3Q9HBV1 291 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 P4HTMQ9NXG6 502 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 CDC23Q9UJX2 597 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 KLHL20Q9Y2M5 609 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 VWA7Q9Y334 891 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 PCM1Q15154 2024 aa10.89□□□□□ -0.67
LINC00648-204ENST00000557749 KCNE1BA0A087WTH5 132 aa10.88□□□□□ -0.67
LINC00648-204ENST00000557749 H0YGG7 62 aa10.88□□□□□ -0.67
LINC00648-204ENST00000557749 OIP5O43482 229 aa10.88□□□□□ -0.67
LINC00648-204ENST00000557749 HCRTR1O43613 425 aa10.88□□□□□ -0.67
LINC00648-204ENST00000557749 AHSGP02765 367 aa10.88□□□□□ -0.67
LINC00648-204ENST00000557749 FDXRP22570 491 aa10.88□□□□□ -0.67
LINC00648-204ENST00000557749 CXCR2P25025 360 aa10.88□□□□□ -0.67
LINC00648-204ENST00000557749 IMPA1P29218 277 aa10.88□□□□□ -0.67
LINC00648-204ENST00000557749 AVPR1BP47901 424 aa10.88□□□□□ -0.67
LINC00648-204ENST00000557749 SLC12A2P55011 1212 aa10.88□□□□□ -0.67
LINC00648-204ENST00000557749 ARF3P61204 181 aaPredicted RBP10.88□□□□□ -0.67
LINC00648-204ENST00000557749 TBPL1P62380 186 aa10.88□□□□□ -0.67
LINC00648-204ENST00000557749 FASTKQ14296 549 aaKnown RBP10.88□□□□□ -0.67
LINC00648-204ENST00000557749 MYBPC3Q14896 1274 aa10.88□□□□□ -0.67
LINC00648-204ENST00000557749 RBBP7Q16576 425 aa10.88□□□□□ -0.67
LINC00648-204ENST00000557749 NKG7Q16617 165 aa10.88□□□□□ -0.67
LINC00648-204ENST00000557749 PRTGQ2VWP7 1150 aa10.88□□□□□ -0.67
LINC00648-204ENST00000557749 HECTD2Q5U5R9 776 aa10.88□□□□□ -0.67
LINC00648-204ENST00000557749 CPZQ66K79 652 aa10.88□□□□□ -0.67
LINC00648-204ENST00000557749 DUPD1Q68J44 220 aa10.88□□□□□ -0.67
LINC00648-204ENST00000557749 SUSD1Q6UWL2 747 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms