RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 GYS2P54840 703 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 IL2P60568 153 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 RELAQ04206 551 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 ILF2Q12905 390 aaKnown RBP7□□□□□ -1.29
SCFD1-222ENST00000556768 FASTKQ14296 549 aaKnown RBP7□□□□□ -1.29
SCFD1-222ENST00000556768 NDUFA9Q16795 377 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 FAM69BQ5VUD6 431 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 PAPD7Q5XG87 772 aaKnown RBP7□□□□□ -1.29
SCFD1-222ENST00000556768 ICE2Q659A1 982 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 CPZQ66K79 652 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 MRPL14Q6P1L8 145 aaKnown RBP7□□□□□ -1.29
SCFD1-222ENST00000556768 MAATS1Q7Z4T9 603 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 CYP4X1Q8N118 509 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 GALNT16Q8N428 558 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 C2CD4AQ8NCU7 369 aaPredicted RBP7□□□□□ -1.29
SCFD1-222ENST00000556768 BBOF1Q8ND07 529 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 FDCSPQ8NFU4 85 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 FBXO27Q8NI29 283 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 MVB12AQ96EY5 273 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 SNF8Q96H20 258 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 CABS1Q96KC9 395 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 PKP4Q99569 1192 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 PLCD4Q9BRC7 762 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 AARSD1Q9BTE6 412 aaKnown RBP7□□□□□ -1.29
SCFD1-222ENST00000556768 KCNF1Q9H3M0 494 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 PARVBQ9HBI1 364 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 CCDC177Q9NQR7 707 aaPredicted RBP7□□□□□ -1.29
SCFD1-222ENST00000556768 P4HTMQ9NXG6 502 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 C5AR2Q9P296 337 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 GALPQ9UBC7 116 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 ZNF282Q9UDV7 671 aaPredicted RBP7□□□□□ -1.29
SCFD1-222ENST00000556768 TAC3Q9UHF0 121 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 CORO1CQ9ULV4 474 aaPredicted RBP7□□□□□ -1.29
SCFD1-222ENST00000556768 OR2A25A4D2G3 310 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 EFCAB8A8MWE9 144 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 E7ENX8 843 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 CTSVO60911 334 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 AHSGP02765 367 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 ERGP11308 486 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 NR1D1P20393 614 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 CXCR2P25025 360 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 SOX18P35713 384 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 OR1D4P47884 311 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 MLLT10P55197 1068 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 MPP1Q00013 466 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 TAP2Q03519 686 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 CALCOCO2Q13137 446 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 AIMP2Q13155 320 aaKnown RBP6.99□□□□□ -1.29
SCFD1-222ENST00000556768 MYBPC3Q14896 1274 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.99□□□□□ -1.29
SCFD1-222ENST00000556768 VWA5B1Q5TIE3 1220 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 GARNL3Q5VVW2 1013 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 BNC2Q6ZN30 1099 aaPredicted RBP6.99□□□□□ -1.29
SCFD1-222ENST00000556768 CREG2Q8IUH2 290 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 CPNE9Q8IYJ1 553 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 TBC1D19Q8N5T2 526 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 CSNK1A1LQ8N752 337 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 GPATCH11Q8N954 259 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 CD200R1Q8TD46 325 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 ZNF480Q8WV37 535 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 EEF1AKMT1Q8WVE0 214 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 ATL1Q8WXF7 558 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 GATAD2BQ8WXI9 593 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 HPS1Q92902 700 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 MIEF2Q96C03 454 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 CERS2Q96G23 380 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 CFAP36Q96G28 342 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 VPS39Q96JC1 886 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 ZNF285Q96NJ3 590 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 FAM129AQ9BZQ8 928 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 SLC26A1Q9H2B4 701 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 RUBCNLQ9H714 662 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 MLXIPLQ9NP71 852 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 ENAMQ9NRM1 1142 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 SEMA3GQ9NS98 782 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 TXNDC16Q9P2K2 825 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 VWA7Q9Y334 891 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 MAU2Q9Y6X3 613 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 LOC105369274A0A096LPK9 316 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 LOC102723532A0A0G2JNH3 316 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 A0A1W2PPV9 198 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 FAM221AA4D161 298 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 KRT87PA6NCN2 255 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 H0YGG7 62 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 H7BY64 318 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 K7EM74 188 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 PCDH17O14917 1159 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 SLC16A5O15375 505 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 CEACAM4O75871 244 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 ONECUT2O95948 504 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 CTSBP07858 339 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 UQCRHP07919 91 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 FBLP22087 321 aaKnown RBP6.99□□□□□ -1.29
SCFD1-222ENST00000556768 ITGA3P26006 1051 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 ELK3P41970 407 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 AVPR1BP47901 424 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 SLC12A2P55011 1212 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 ARF3P61204 181 aaPredicted RBP6.99□□□□□ -1.29
SCFD1-222ENST00000556768 SP140Q13342 867 aa6.99□□□□□ -1.29
SCFD1-222ENST00000556768 RAPSNQ13702 412 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms