RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 TRIM49P0CI25 452 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 TRIM49CP0CI26 452 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 CD59P13987 128 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 UGT1A4P22310 534 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 NPY4RP50391 375 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 KRTAP10-5P60370 271 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 IRX4P78413 519 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 CALCOCO2Q13137 446 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 TRA2AQ13595 282 aaKnown RBP eCLIP3.85□□□□□ -1.79
SCFD1-221ENST00000556534 NECTIN1Q15223 517 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 PTPN14Q15678 1187 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 TAB1Q15750 504 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 FAM174BQ3ZCQ3 159 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 C2CD6Q53TS8 623 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 C6orf136Q5SQH8 315 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 OR4C11Q6IEV9 310 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 CTR9Q6PD62 1173 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 METTL7BQ6UX53 244 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 KIF6Q6ZMV9 814 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 SLC24A5Q71RS6 500 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 FCRLAQ7L513 359 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 KRT77Q7Z794 578 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 SLFN11Q7Z7L1 901 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 RCOR2Q8IZ40 523 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 CCAR2Q8N163 923 aaKnown RBP3.85□□□□□ -1.79
SCFD1-221ENST00000556534 FAM89BQ8N5H3 189 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 IQUBQ8NA54 791 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 PRSS33Q8NF86 280 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 P2RX5Q93086 422 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 PYCR2Q96C36 320 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 AGAP3Q96P47 875 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 NDNQ99608 321 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 SDCBP2Q9H190 292 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 UPF3AQ9H1J1 476 aaKnown RBP3.85□□□□□ -1.79
SCFD1-221ENST00000556534 MED20Q9H944 212 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 CHCHD3Q9NX63 227 aaKnown RBP3.85□□□□□ -1.79
SCFD1-221ENST00000556534 CSNK1G3Q9Y6M4 447 aa3.85□□□□□ -1.79
SCFD1-221ENST00000556534 A0A087WV48 116 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 TRBV4-1A0A0J9YWV2 114 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 KPNA7A9QM74 516 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 H7C0S8 307 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 CCER2I3L3R5 266 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 FDPSP14324 419 aaKnown RBP3.84□□□□□ -1.79
SCFD1-221ENST00000556534 MYL6BP14649 208 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 PRKACGP22612 351 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 SOX3P41225 446 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 HNF4AP41235 474 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 OR1D5P58170 312 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 POU5F1Q01860 360 aaKnown RBP3.84□□□□□ -1.79
SCFD1-221ENST00000556534 CACNG1Q06432 222 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 DOK6Q6PKX4 331 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 GTSCR1Q86UQ5 136 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 METTL21AQ8WXB1 218 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 CDCA3Q99618 268 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-221ENST00000556534 EGFL8Q99944 293 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 OVOL2Q9BRP0 275 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 GTPBP2Q9BX10 602 aaKnown RBP3.84□□□□□ -1.79
SCFD1-221ENST00000556534 AP1M1Q9BXS5 423 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 EGLN3Q9H6Z9 239 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 PHPT1Q9NRX4 125 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-221ENST00000556534 GIMAP2Q9UG22 337 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 PRDM4Q9UKN5 801 aa3.84□□□□□ -1.79
SCFD1-221ENST00000556534 ELF5Q9UKW6 265 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-221ENST00000556534 MYH15Q9Y2K3 1946 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 ANXA2P2A6NMY6 339 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 EPM2AB3EWF7 344 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 F8VVB4 439 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 F8VWA3 439 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 SOCS3O14543 225 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 CEACAM4O75871 244 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 F3P13726 295 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 PSMA3P25788 255 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 ELAVL4P26378 380 aaKnown RBP3.83□□□□□ -1.8
SCFD1-221ENST00000556534 TSFMP43897 325 aaKnown RBP3.83□□□□□ -1.8
SCFD1-221ENST00000556534 RGS7P49802 495 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 GMPSP49915 693 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-221ENST00000556534 DCDC1P59894 354 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 NFATC2Q13469 925 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 TAZQ16635 292 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 UGCGQ16739 394 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 CES4AQ5XG92 561 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 FRRS1Q6ZNA5 592 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 CPEB2Q7Z5Q1 589 aaKnown RBP3.83□□□□□ -1.8
SCFD1-221ENST00000556534 NRARPQ7Z6K4 114 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 DNAJB7Q7Z6W7 309 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-221ENST00000556534 CCDC60Q8IWA6 550 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-221ENST00000556534 GPC2Q8N158 579 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 C11orf45Q8TAV5 145 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 NSMAFQ92636 917 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 BTBD9Q96Q07 612 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 MGME1Q9BQP7 344 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 ANAPC5Q9UJX4 755 aa3.83□□□□□ -1.8
SCFD1-221ENST00000556534 PI4K2BG5E9Z4 385 aa3.82□□□□□ -1.8
SCFD1-221ENST00000556534 PI15O43692 258 aa3.82□□□□□ -1.8
SCFD1-221ENST00000556534 PRAF2O60831 178 aa3.82□□□□□ -1.8
SCFD1-221ENST00000556534 APOA4P06727 396 aa3.82□□□□□ -1.8
SCFD1-221ENST00000556534 STAG3L1P0CL83 205 aa3.82□□□□□ -1.8
SCFD1-221ENST00000556534 PRKAR1AP10644 381 aa3.82□□□□□ -1.8
SCFD1-221ENST00000556534 ADRA2CP18825 462 aa3.82□□□□□ -1.8
SCFD1-221ENST00000556534 EPORP19235 508 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms