RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ASB1Q9Y576 335 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 NFS1Q9Y697 457 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 SCN2AQ99250 2005 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 MROH6A6NGR9 719 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 TXNDC9O14530 226 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 FOXS1O43638 330 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 PHF2O75151 1096 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 MBD3O95983 291 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 GAS8O95995 478 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 AOAHP28039 575 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 CCNFP41002 786 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 ACTN3Q08043 901 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-219ENST00000556432 IQCB1Q15051 598 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 NDUFA9Q16795 377 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 FASTKD1Q53R41 847 aaKnown RBP13.14□□□□□ -0.31
ACTN1-219ENST00000556432 RNFT1Q5M7Z0 435 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 PTRHD1Q6GMV3 140 aaKnown RBP13.14□□□□□ -0.31
ACTN1-219ENST00000556432 H3F3CQ6NXT2 135 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 ADCK2Q7Z695 626 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 FGD2Q7Z6J4 655 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 LUZP1Q86V48 1076 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 CHERPQ8IWX8 916 aaKnown RBP13.14□□□□□ -0.31
ACTN1-219ENST00000556432 MARVELD2Q8N4S9 558 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 LILRB4Q8NHJ6 448 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 FAM57AQ8TBR7 257 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 MAGEC3Q8TD91 643 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 NINJ1Q92982 152 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 CARD6Q9BX69 1037 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 SLC24A3Q9HC58 644 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 UTP6Q9NYH9 597 aaKnown RBP13.14□□□□□ -0.31
ACTN1-219ENST00000556432 IFNKQ9P0W0 207 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 PCYOX1Q9UHG3 505 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 RNF6Q9Y252 685 aa13.14□□□□□ -0.31
ACTN1-219ENST00000556432 A0A1B0GTH9 108 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 A0A1W2PPV9 198 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 SOWAHDA6NJG2 315 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 PJA2O43164 708 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 NEURL1O76050 574 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 TOXO94900 526 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 STATHP02808 62 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 PKMP14618 531 aaKnown RBP13.13□□□□□ -0.31
ACTN1-219ENST00000556432 PRAMEP78395 509 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 PARP6Q2NL67 630 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 KCTD11Q693B1 232 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 SUSD1Q6UWL2 747 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 OTOAQ7RTW8 1153 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 ANKRD37Q7Z713 158 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 CCDC71Q8IV32 467 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-219ENST00000556432 CLYBLQ8N0X4 340 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 OR9A4Q8NGU2 314 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 OR4L1Q8NH43 312 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 HMGCLL1Q8TB92 370 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 KRT35Q92764 455 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 TMEM125Q96AQ2 219 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 MRFAP1L1Q96HT8 127 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 DNAJC7Q99615 494 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 NPAS2Q99743 824 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 NHEJ1Q9H9Q4 299 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-219ENST00000556432 ABCF3Q9NUQ8 709 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 SPATA7Q9P0W8 599 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 HCN3Q9P1Z3 774 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 SLC2A6Q9UGQ3 507 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 ANAPC5Q9UJX4 755 aa13.13□□□□□ -0.31
ACTN1-219ENST00000556432 OR2W5A6NFC9 320 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 NDC80O14777 642 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 P2RX6O15547 441 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 NME2P1O60361 137 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 PRMT3O60678 531 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 HOXD4P09016 255 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-219ENST00000556432 EZRP15311 586 aaKnown RBP13.12□□□□□ -0.31
ACTN1-219ENST00000556432 NME2P22392 152 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 RFC3P40938 356 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 XCR1P46094 333 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 AGTR2P50052 363 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 COPS2P61201 443 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 LTBQ06643 244 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 TFF3Q07654 80 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 SFT2D3Q587I9 215 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 AARS2Q5JTZ9 985 aaKnown RBP13.12□□□□□ -0.31
ACTN1-219ENST00000556432 PAPD4Q6PIY7 484 aaKnown RBP13.12□□□□□ -0.31
ACTN1-219ENST00000556432 LDB1Q86U70 411 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-219ENST00000556432 PAQR7Q86WK9 346 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 FAM71DQ8N9W8 422 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 OR13J1Q8NGT2 312 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 M1APQ8TC57 530 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 MCOLN3Q8TDD5 553 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 SMPDL3AQ92484 453 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 PANX3Q96QZ0 392 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 OR2A5Q96R48 311 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 CHP1Q99653 195 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 OLFM1Q99784 485 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 POLDIP3Q9BY77 421 aaKnown RBP13.12□□□□□ -0.31
ACTN1-219ENST00000556432 CDCP1Q9H5V8 836 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 SYNPO2LQ9H987 977 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 MMP25Q9NPA2 562 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 TAC3Q9UHF0 121 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 ST6GALNAC2Q9UJ37 374 aa13.12□□□□□ -0.31
ACTN1-219ENST00000556432 R3HDM2Q9Y2K5 976 aaKnown RBP13.12□□□□□ -0.31
ACTN1-219ENST00000556432 FAM237BA0A1B0GVD1 139 aa13.11□□□□□ -0.31
ACTN1-219ENST00000556432 GOLGA6L19H0YKK7 550 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms