RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 TMEM205Q6UW68 189 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 UBE2R2Q712K3 238 aaPredicted RBP12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 PCGF5Q86SE9 256 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 LAPTM4BQ86VI4 370 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 KCNMB4Q86W47 210 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 CPNE9Q8IYJ1 553 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 PPFIBP2Q8ND30 876 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 MCOLN3Q8TDD5 553 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 MMABQ96EY8 250 aaPredicted RBP12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 CCDC138Q96M89 665 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 RNF32Q9H0A6 362 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 ZNF700Q9H0M5 742 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 ZNF160Q9HCG1 818 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 CCDC177Q9NQR7 707 aaPredicted RBP12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 TAS2R13Q9NYV9 303 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 ERRFI1Q9UJM3 462 aaPredicted RBP12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 NTNG1Q9Y2I2 539 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 MRPS2Q9Y399 296 aaKnown RBP12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 CSAG2Q9Y5P2 127 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 SPTBN1Q01082 2364 aaKnown RBP12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 CCDC88CQ9P219 2028 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 HAT1O14929 419 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 BMP10O95393 424 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 NSA2O95478 260 aaKnown RBP12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 SYF2O95926 243 aaKnown RBP12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 RNF224P0DH78 156 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 EDN3P14138 238 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 AVPR1BP47901 424 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 TBPL1P62380 186 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 MPP1Q00013 466 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 KCTD19Q17RG1 926 aaPredicted RBP12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 SPANXN3Q5MJ09 141 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 THEMIS2Q5TEJ8 643 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 MAMDC2Q7Z304 686 aaPredicted RBP12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 PIWIL4Q7Z3Z4 852 aaKnown RBP12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 FAR1Q8WVX9 515 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 PSMF1Q92530 271 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 HAS2Q92819 552 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 C8orf44Q96CB5 159 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 C5orf34Q96MH7 638 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 SARGQ9BW04 601 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 PARVBQ9HBI1 364 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 STOX2Q9P2F5 926 aaPredicted RBP12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 TRMT6Q9UJA5 497 aaKnown RBP12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 CORO1CQ9ULV4 474 aaPredicted RBP12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 SNX12Q9UMY4 172 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 ESPL1Q14674 2120 aa12.05□□□□□ -0.48
HNRNPC-221ENST00000555883 A0A0A6YYC8 382 aaPredicted RBP12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 DYTNA2CJ06 578 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 H7BY64 318 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 I3L1I5 382 aaPredicted RBP12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 E2F3O00716 465 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 DNALI1O14645 258 aaPredicted RBP12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 P2RX6O15547 441 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 ZSCAN12O43309 604 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 KLHL18O94889 574 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 HEXBP07686 556 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 TIAL1Q01085 375 aaKnown RBP eCLIP12.04□□□□□ -0.481e-6■■□□□ 13.9
HNRNPC-221ENST00000555883 CDC16Q13042 620 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 TSTA3Q13630 321 aaPredicted RBP12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 PPP1R7Q15435 360 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 TMEM214Q6NUQ4 689 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 VN1R4Q7Z5H5 301 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 ADCK2Q7Z695 626 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 ZC3H7AQ8IWR0 971 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 PALM2Q8IXS6 379 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 PRSS58Q8IYP2 241 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 GRHL3Q8TE85 626 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 TM4SF19Q96DZ7 209 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 PRAP1Q96NZ9 151 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 SLX1AQ9BQ83 275 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 MESP1Q9BRJ9 268 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 TUBB6Q9BUF5 446 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 SGPP1Q9BX95 441 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 IARS2Q9NSE4 1012 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 PDE10AQ9Y233 779 aa12.04□□□□□ -0.48
HNRNPC-221ENST00000555883 TRAV17A0A0B4J275 112 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 C8orf89P0DMQ9 161 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 TCP1P17987 556 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 IL10P22301 178 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 GABRB3P28472 473 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 TNFSF10P50591 281 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 AP1S2P56377 157 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 CSNK1G2P78368 415 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 FRG1Q14331 258 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 PCOLCEQ15113 449 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 ZNF324BQ6AW86 544 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 AGTRAPQ6RW13 159 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 FAM180AQ6UWF9 173 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 LCTLQ6UWM7 567 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 SYDE1Q6ZW31 735 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 C17orf64Q86WR6 236 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 MYO1HQ8N1T3 1032 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 SLC35F6Q8N357 371 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 BCORP1Q8N888 145 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 CAMKVQ8NCB2 501 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 ABHD11Q8NFV4 315 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 EEF1AKMT1Q8WVE0 214 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 LRRC39Q96DD0 335 aa12.03□□□□□ -0.48
HNRNPC-221ENST00000555883 CERS2Q96G23 380 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms