RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 PABPN1LA6NDY0 278 aaKnown RBP11.79□□□□□ -0.52
SYNE2-214ENST00000554928 LRRC14BA6NHZ5 514 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 FFAR3O14843 346 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 GPR42O15529 346 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 WDR47O94967 919 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 MTHFD2P13995 350 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 EZRP15311 586 aaKnown RBP11.79□□□□□ -0.52
SYNE2-214ENST00000554928 EPORP19235 508 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 ALAS2P22557 587 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 TYK2P29597 1187 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 OR1D4P47884 311 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 HSPA7P48741 367 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 ERV3-1Q14264 604 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 ERCC6LQ2NKX8 1250 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 TBC1D1Q86TI0 1168 aaPredicted RBP11.79□□□□□ -0.52
SYNE2-214ENST00000554928 KLHDC8AQ8IYD2 350 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 CSNK1A1LQ8N752 337 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 EIF1ADQ8N9N8 165 aaKnown RBP11.79□□□□□ -0.52
SYNE2-214ENST00000554928 PDPRQ8NCN5 879 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 ABHD11Q8NFV4 315 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 SLC5A11Q8WWX8 675 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 ATL1Q8WXF7 558 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 TTC9Q92623 222 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 KIAA1143Q96AT1 154 aaPredicted RBP11.79□□□□□ -0.52
SYNE2-214ENST00000554928 MOCOSQ96EN8 888 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 NDC1Q9BTX1 674 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 PCBD2Q9H0N5 130 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 NMRAL1Q9HBL8 299 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 TMEM184CQ9NVA4 438 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 CD274Q9NZQ7 290 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 NDOR1Q9UHB4 597 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 ZNF180Q9UJW8 692 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 PTBP2Q9UKA9 531 aaKnown RBP11.79□□□□□ -0.52
SYNE2-214ENST00000554928 RNF112Q9ULX5 631 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 AP1M2Q9Y6Q5 423 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 MAU2Q9Y6X3 613 aa11.79□□□□□ -0.52
SYNE2-214ENST00000554928 PCSK5Q92824 1860 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 A0A087X1B8 175 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 SUPT3HB4E1H0 165 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 SRPX2O60687 465 aaPredicted RBP11.78□□□□□ -0.52
SYNE2-214ENST00000554928 KERAO60938 352 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 SUPT3HO75486 399 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 RFPL1O75677 317 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 KLHL2O95198 593 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 KLK3P07288 261 aaPredicted RBP11.78□□□□□ -0.52
SYNE2-214ENST00000554928 SERPINB9P50453 376 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 CDC20Q12834 499 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 GRM7Q14831 915 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 NCF4Q15080 339 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 TBR1Q16650 682 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 LINC00303Q3SY05 128 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 TECRLQ5HYJ1 363 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 TCTE1Q5JU00 501 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 MLIPQ5VWP3 458 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 FAM219BQ5XKK7 198 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 ADGRD1Q6QNK2 874 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 PRSS41Q7RTY9 318 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 TMPRSS11BQ86T26 416 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 TTC29Q8NA56 475 aaPredicted RBP11.78□□□□□ -0.52
SYNE2-214ENST00000554928 OR4K1Q8NGD4 311 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 MZB1Q8WU39 189 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 UBLCP1Q8WVY7 318 aaPredicted RBP11.78□□□□□ -0.52
SYNE2-214ENST00000554928 EXTL1Q92935 676 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 HAUS8Q9BT25 410 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 WWOXQ9NZC7 414 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 TLK1Q9UKI8 766 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 SRPK3Q9UPE1 567 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 FARSAQ9Y285 508 aaKnown RBP11.78□□□□□ -0.52
SYNE2-214ENST00000554928 PCDHGA6Q9Y5G7 932 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 CHD6Q8TD26 2715 aa11.78□□□□□ -0.52
SYNE2-214ENST00000554928 A0A1B0GX78 115 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 CDC14CA4D256 554 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 ZNF891A8MT65 544 aaPredicted RBP11.77□□□□□ -0.53
SYNE2-214ENST00000554928 C21orf140B9A014 251 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 DSCR3O14972 297 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 FOXS1O43638 330 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 CREG1O75629 220 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 KLF7O75840 302 aaPredicted RBP11.77□□□□□ -0.53
SYNE2-214ENST00000554928 B3GALT4O96024 378 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 HBQ1P09105 142 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 SBK3P0C264 359 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 CCND1P24385 295 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 PTPN4P29074 926 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 GGT5P36269 586 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 HSD17B3P37058 310 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 SLC26A3P40879 764 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 SLCO1A2P46721 670 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 DCDP81605 110 aaKnown RBP11.77□□□□□ -0.53
SYNE2-214ENST00000554928 REEP5Q00765 189 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 RELAQ04206 551 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 NKAIN1Q4KMZ8 207 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 TAF1BQ53T94 588 aaPredicted RBP11.77□□□□□ -0.53
SYNE2-214ENST00000554928 SULT1C3Q6IMI6 304 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 ADNP2Q6IQ32 1131 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 MRPL14Q6P1L8 145 aaKnown RBP11.77□□□□□ -0.53
SYNE2-214ENST00000554928 NXPE4Q6UWF7 544 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 SLCO4C1Q6ZQN7 724 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 CYP4X1Q8N118 509 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 ANKRD53Q8N9V6 530 aa11.77□□□□□ -0.53
SYNE2-214ENST00000554928 MFSD9Q8NBP5 474 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms