RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 ENAMQ9NRM1 1142 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 TREX1Q9NSU2 369 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 IRAK4Q9NWZ3 460 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 ZFATQ9P243 1243 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 CTSFQ9UBX1 484 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 HS3ST3B1Q9Y662 390 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 CPAMD8Q8IZJ3 1885 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 E2F3O00716 465 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 DSCR3O14972 297 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 PRPF4O43172 522 aaKnown RBP eCLIP10.11□□□□□ -0.79
SHMT2-215ENST00000554656 SHOX2O60902 331 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-215ENST00000554656 DDAH2O95865 285 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 S1PR4O95977 384 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 ALPPP05187 535 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 KRT15P19012 456 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 ALAS2P22557 587 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 MMP11P24347 488 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 VARSP26640 1264 aaKnown RBP10.11□□□□□ -0.79
SHMT2-215ENST00000554656 ARNTP27540 789 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 GP5P40197 560 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 YBX1P67809 324 aaKnown RBP10.11□□□□□ -0.79
SHMT2-215ENST00000554656 PRAMEP78395 509 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 Q0VFX4 171 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 NKG7Q16617 165 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 CYP2A13Q16696 494 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 GRTP1Q5TC63 336 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 ZNF787Q6DD87 383 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 KIRREL2Q6UWL6 708 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 UNC5DQ6UXZ4 953 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 TIFABQ6ZNK6 161 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 SHISA6Q6ZSJ9 500 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 KIAA0408Q6ZU52 694 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 OVCH1Q7RTY7 1134 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 GALNT7Q86SF2 657 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 KCNMB4Q86W47 210 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 SPNS2Q8IVW8 549 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 CTAGE3PQ8IX95 158 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 METTL27Q8N6F8 245 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-215ENST00000554656 PPM1NQ8N819 430 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 CALML6Q8TD86 181 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 ACMSDQ8TDX5 336 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 DENND1AQ8TEH3 1009 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 ASZ1Q8WWH4 475 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 ILKAPQ9H0C8 392 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-215ENST00000554656 P2RY12Q9H244 342 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 SLC26A1Q9H2B4 701 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 SYNPO2LQ9H987 977 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 CHRAC1Q9NRG0 131 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 SMYD2Q9NRG4 433 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 CUTCQ9NTM9 273 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 MKS1Q9NXB0 559 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 CTNNAL1Q9UBT7 734 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 TBK1Q9UHD2 729 aa10.11□□□□□ -0.79
SHMT2-215ENST00000554656 A0A1W2PPV9 198 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 FITM1A5D6W6 292 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 PRMT5O14744 637 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-215ENST00000554656 IGHEP01854 428 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 APOA4P06727 396 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 ITGA3P26006 1051 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 NMBRP28336 390 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 HPDP32754 393 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-215ENST00000554656 SPRP35270 261 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-215ENST00000554656 OR1D4P47884 311 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 SLC18A2Q05940 514 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 AIMP2Q13155 320 aaKnown RBP10.1□□□□□ -0.79
SHMT2-215ENST00000554656 EFTUD2Q15029 972 aaKnown RBP eCLIP10.1□□□□□ -0.796e-8■■■■■ 32.8
SHMT2-215ENST00000554656 FASTKD1Q53R41 847 aaKnown RBP10.1□□□□□ -0.79
SHMT2-215ENST00000554656 TEDDM1Q5T9Z0 273 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 PRAMEF13Q5VWM6 474 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 FRMPD2BQ6IN97 320 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 IGFL2Q6UWQ7 119 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 MAMDC2Q7Z304 686 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-215ENST00000554656 CYP4X1Q8N118 509 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 DLG3Q92796 817 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 MFSD3Q96ES6 412 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 SMC6Q96SB8 1091 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 FAM167BQ9BTA0 163 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 CAPS2Q9BXY5 557 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 SOX17Q9H6I2 414 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-215ENST00000554656 WDR54Q9H977 334 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 ATP13A2Q9NQ11 1180 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 CATSPERZQ9NTU4 200 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 STOX2Q9P2F5 926 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-215ENST00000554656 TXNDC16Q9P2K2 825 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 KLK4Q9Y5K2 254 aa10.1□□□□□ -0.79
SHMT2-215ENST00000554656 CREBBPQ92793 2442 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 ABCA12Q86UK0 2595 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 LOC105369274A0A096LPK9 316 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 LOC102723532A0A0G2JNH3 316 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 ANKUB1A6NFN9 424 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 VSTM2BA6NLU5 285 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 CXorf49A8MYA2 514 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-215ENST00000554656 CD3EAPO15446 510 aaKnown RBP10.09□□□□□ -0.79
SHMT2-215ENST00000554656 KDM1AO60341 852 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 IPO13O94829 963 aaKnown RBP10.09□□□□□ -0.79
SHMT2-215ENST00000554656 C1orf105O95561 183 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 ALBP02768 609 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 RPN2P04844 631 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 CD63P08962 238 aa10.09□□□□□ -0.79
SHMT2-215ENST00000554656 DCTP40126 519 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms