RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 PRPF4O43172 522 aaKnown RBP eCLIP7.17□□□□□ -1.26
LINC00640-201ENST00000554409 WISP3O95389 354 aaPredicted RBP7.17□□□□□ -1.26
LINC00640-201ENST00000554409 MED26O95402 600 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 EIF2S1P05198 315 aaKnown RBP7.17□□□□□ -1.26
LINC00640-201ENST00000554409 NPPBP16860 134 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 MMP11P24347 488 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 SSTR1P30872 391 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 OTX2P32243 289 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 CASRP41180 1078 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 PGGT1BP53609 377 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 PLTPP55058 493 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 SOX8P57073 446 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 GPX6P59796 221 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 RPS15AP62244 130 aaKnown RBP7.17□□□□□ -1.26
LINC00640-201ENST00000554409 CDKL1Q00532 357 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 POU4F1Q01851 419 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 KLRB1Q12918 225 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 CHAF1BQ13112 559 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 NAB1Q13506 487 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 NAE1Q13564 534 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 FAM53BQ14153 422 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 ZXDCQ2QGD7 858 aaPredicted RBP7.17□□□□□ -1.26
LINC00640-201ENST00000554409 CAPN13Q6MZZ7 669 aaPredicted RBP7.17□□□□□ -1.26
LINC00640-201ENST00000554409 C8orf74Q6P047 294 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 C3orf62Q6ZUJ4 267 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 ASB18Q6ZVZ8 466 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 PRICKLE2Q7Z3G6 844 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 PPP1R32Q7Z5V6 425 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 ADCK2Q7Z695 626 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 C17orf64Q86WR6 236 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 HPS6Q86YV9 775 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 OR56A3Q8NH54 315 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.17□□□□□ -1.26
LINC00640-201ENST00000554409 ATL1Q8WXF7 558 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 RERGQ96A58 199 aaPredicted RBP7.17□□□□□ -1.26
LINC00640-201ENST00000554409 CABS1Q96KC9 395 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 FER1L6-AS2Q96M78 137 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 GPR22Q99680 433 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 RBBP8Q99708 897 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 CPNE1Q99829 537 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 HAUS8Q9BT25 410 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 SARGQ9BW04 601 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 FAM129AQ9BZQ8 928 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 ATG10Q9H0Y0 220 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 GPAMQ9HCL2 828 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 ZNF304Q9HCX3 659 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 ZNF71Q9NQZ8 489 aaPredicted RBP7.17□□□□□ -1.26
LINC00640-201ENST00000554409 ARL15Q9NXU5 204 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 IKZF3Q9UKT9 509 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 CDC14AQ9UNH5 594 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 SH2B3Q9UQQ2 575 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 RUVBL1Q9Y265 456 aaKnown RBP7.17□□□□□ -1.26
LINC00640-201ENST00000554409 ZNF462Q96JM2 2506 aa7.17□□□□□ -1.26
LINC00640-201ENST00000554409 MED13Q9UHV7 2174 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 TLN1Q9Y490 2541 aaKnown RBP7.16□□□□□ -1.26
LINC00640-201ENST00000554409 CXorf49A8MYA2 514 aaPredicted RBP7.16□□□□□ -1.26
LINC00640-201ENST00000554409 H7BY64 318 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 AGPSO00116 658 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 KIF2AO00139 706 aaPredicted RBP7.16□□□□□ -1.26
LINC00640-201ENST00000554409 PEX12O00623 359 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 SOCS6O14544 535 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 P2RX6O15547 441 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 KLHL41O60662 606 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 URI1O94763 535 aaPredicted RBP7.16□□□□□ -1.26
LINC00640-201ENST00000554409 PDGFAP04085 211 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 NR1D1P20393 614 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 FBLP22087 321 aaKnown RBP7.16□□□□□ -1.26
LINC00640-201ENST00000554409 STX2P32856 288 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 GP5P40197 560 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 SLC26A3P40879 764 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 MAGEA4P43358 317 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 OR1D4P47884 311 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 HNMTP50135 292 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 CCL11P51671 97 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 PGDP52209 483 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 TAS2R39P59534 338 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 CSNK1G2P78368 415 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 GUCY2DQ02846 1103 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 TRADDQ15628 312 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 NDUFA9Q16795 377 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 HKDC1Q2TB90 917 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 DCAF10Q5QP82 559 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 CAPN12Q6ZSI9 719 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 VN1R4Q7Z5H5 301 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 ADAMTSL2Q86TH1 951 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 PTRH1Q86Y79 214 aaKnown RBP7.16□□□□□ -1.26
LINC00640-201ENST00000554409 CEP97Q8IW35 865 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 KLHDC8AQ8IYD2 350 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 MMGT1Q8N4V1 131 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 DTWD1Q8N5C7 304 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 AMER3Q8N944 861 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 CLEC1AQ8NC01 280 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 ABHD11Q8NFV4 315 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 OR4K1Q8NGD4 311 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 ANKRD49Q8WVL7 239 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 COL26A1Q96A83 441 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 TM4SF19Q96DZ7 209 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 TSPAN17Q96FV3 270 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 PRAP1Q96NZ9 151 aa7.16□□□□□ -1.26
LINC00640-201ENST00000554409 OR4K3Q96R72 315 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms