RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 GPLD1P80108 840 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 SUZ12Q15022 739 aaKnown RBP7.35□□□□□ -1.23
TDP1-209ENST00000554180 NR6A1Q15406 480 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 LPAL2Q16609 132 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 GSTA3Q16772 222 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 C6orf136Q5SQH8 315 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 NXNQ6DKJ4 435 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 Q6ZSR9 355 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 SPATA19Q7Z5L4 167 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 YTHDF3Q7Z739 585 aaKnown RBP7.35□□□□□ -1.23
TDP1-209ENST00000554180 ZFAND4Q86XD8 727 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 FAM9CQ8IZT9 166 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 CPSF7Q8N684 471 aaKnown RBP7.35□□□□□ -1.23
TDP1-209ENST00000554180 FITM2Q8N6M3 262 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 OR2T11Q8NH01 316 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 OR10G6Q8NH81 332 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 HUS1BQ8NHY5 278 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 JPH3Q8WXH2 748 aaPredicted RBP7.35□□□□□ -1.23
TDP1-209ENST00000554180 NAT6Q93015 286 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 ZUFSPQ96AP4 578 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 THAP11Q96EK4 314 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 CMTM7Q96FZ5 175 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 PPP1R36Q96LQ0 422 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 PRAP1Q96NZ9 151 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 CD180Q99467 661 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 SERPINI1Q99574 410 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 SLC38A3Q99624 504 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 NRTNQ99748 197 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 DPH7Q9BTV6 452 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 ACPTQ9BZG2 426 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 IRF2BPLQ9H1B7 796 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 ARRDC1-AS1Q9H2J1 176 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 SPNS1Q9H2V7 528 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 ZNF385DQ9H6B1 395 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 SLC6A20Q9NP91 592 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 DMRT3Q9NQL9 472 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 SAR1AQ9NR31 198 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 EVA1BQ9NVM1 165 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 HRASLS2Q9NWW9 162 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 C1orf109Q9NX04 203 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 PTGDR2Q9Y5Y4 395 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 R4GN57 208 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 ARID1BQ8NFD5 2236 aaPredicted RBP7.34□□□□□ -1.23
TDP1-209ENST00000554180 ANKDD1BA6NHY2 528 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 DUX1O43812 170 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 HNRNPCL1O60812 293 aaKnown RBP7.34□□□□□ -1.23
TDP1-209ENST00000554180 LRP3O75074 770 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 CLEC3AO75596 197 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 PCNAP12004 261 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 AMD1P17707 334 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 ENGP17813 658 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 NCF2P19878 526 aaPredicted RBP7.34□□□□□ -1.23
TDP1-209ENST00000554180 PTX3P26022 381 aaPredicted RBP7.34□□□□□ -1.23
TDP1-209ENST00000554180 MAPK1P28482 360 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 PRDX6P30041 224 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 GRIA3P42263 894 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 GRK6P43250 576 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 SCTRP47872 440 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 ACADVLP49748 655 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 NEK2P51955 445 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 ARFIP1P53367 373 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 STX1BP61266 288 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 EMX2Q04743 252 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 CUL3Q13618 768 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 SQLEQ14534 574 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 KRT72Q14CN4 511 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 NR0B2Q15466 257 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 CLPPQ16740 277 aaPredicted RBP7.34□□□□□ -1.23
TDP1-209ENST00000554180 AP5B1Q2VPB7 878 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 SPIN4Q56A73 249 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 CACHD1Q5VU97 1274 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 KIAA1614Q5VZ46 1190 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 GALNT18Q6P9A2 607 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 CCDC121Q6ZUS5 278 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 ADCK2Q7Z695 626 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 PAQR7Q86WK9 346 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 ZNF761Q86XN6 746 aaPredicted RBP7.34□□□□□ -1.23
TDP1-209ENST00000554180 GATAD2AQ86YP4 633 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.34□□□□□ -1.23
TDP1-209ENST00000554180 MINDY1Q8N5J2 469 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 FNDC5Q8NAU1 212 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 SUMF1Q8NBK3 374 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 TRPV3Q8NET8 790 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 RSC1A1Q92681 617 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 C11orf24Q96F05 449 aaPredicted RBP7.34□□□□□ -1.23
TDP1-209ENST00000554180 ZDHHC12Q96GR4 267 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 FCRL1Q96LA6 429 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 APOLD1Q96LR9 279 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 HBEGFQ99075 208 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 MTERF1Q99551 399 aaKnown RBP7.34□□□□□ -1.23
TDP1-209ENST00000554180 CENPKQ9BS16 269 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 TUBB6Q9BUF5 446 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 TBC1D10AQ9BXI6 508 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 BRINP2Q9C0B6 783 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 CHRNA10Q9GZZ6 450 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 IL21RQ9HBE5 538 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 LRTM1Q9HBL6 345 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 SDR39U1Q9NRG7 319 aaPredicted RBP7.34□□□□□ -1.23
TDP1-209ENST00000554180 C1GALT1Q9NS00 363 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 FARSBQ9NSD9 589 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms