RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 OLIG1Q8TAK6 271 aa4.78□□□□□ -1.64
FOXN3-206ENST00000554005 SSMEM1Q8WWF3 244 aa4.78□□□□□ -1.64
FOXN3-206ENST00000554005 ROBO4Q8WZ75 1007 aa4.78□□□□□ -1.64
FOXN3-206ENST00000554005 DHX58Q96C10 678 aa4.78□□□□□ -1.64
FOXN3-206ENST00000554005 SLC47A1Q96FL8 570 aa4.78□□□□□ -1.64
FOXN3-206ENST00000554005 ZNF354BQ96LW1 612 aa4.78□□□□□ -1.64
FOXN3-206ENST00000554005 ZNF396Q96N95 335 aaPredicted RBP4.78□□□□□ -1.64
FOXN3-206ENST00000554005 ZNF558Q96NG5 402 aa4.78□□□□□ -1.64
FOXN3-206ENST00000554005 EDEM3Q9BZQ6 932 aa4.78□□□□□ -1.64
FOXN3-206ENST00000554005 MMP28Q9H239 520 aa4.78□□□□□ -1.64
FOXN3-206ENST00000554005 ZNF701Q9NV72 531 aaPredicted RBP4.78□□□□□ -1.64
FOXN3-206ENST00000554005 CHCHD3Q9NX63 227 aaKnown RBP4.78□□□□□ -1.64
FOXN3-206ENST00000554005 ACAD8Q9UKU7 415 aa4.78□□□□□ -1.64
FOXN3-206ENST00000554005 LIPGQ9Y5X9 500 aa4.78□□□□□ -1.64
FOXN3-206ENST00000554005 SNED1Q8TER0 1413 aa4.78□□□□□ -1.64
FOXN3-206ENST00000554005 MED23Q9ULK4 1368 aa4.78□□□□□ -1.64
FOXN3-206ENST00000554005 A0A0G2JLW4 131 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 FGF17O60258 216 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 RNASEH1O60930 286 aaKnown RBP4.77□□□□□ -1.65
FOXN3-206ENST00000554005 IGHV2-70P01814 119 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 UQCRFS1P1P0C7P4 283 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 EPHA2P29317 976 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 ADORA1P30542 326 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 GTF2A1P52655 376 aaPredicted RBP4.77□□□□□ -1.65
FOXN3-206ENST00000554005 SYT14P1Q58G82 188 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 DNAJC21Q5F1R6 531 aaKnown RBP4.77□□□□□ -1.65
FOXN3-206ENST00000554005 TECRLQ5HYJ1 363 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 SPECC1Q5M775 1068 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 CCDC158Q5M9N0 1113 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 MFSD12Q6NUT3 480 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 IL27RAQ6UWB1 636 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 SUSD1Q6UWL2 747 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 VSIG1Q86XK7 387 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 GRHL3Q8TE85 626 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 IRGQQ8WZA9 623 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 SPSB1Q96BD6 273 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 CPNE1Q99829 537 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 PSD2Q9BQI7 771 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 RTP3Q9BQQ7 232 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 LZTS2Q9BRK4 669 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 A4GALTQ9NPC4 353 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 FAM118AQ9NWS6 357 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 UTP6Q9NYH9 597 aaKnown RBP4.77□□□□□ -1.65
FOXN3-206ENST00000554005 CPSF3Q9UKF6 684 aaKnown RBP4.77□□□□□ -1.65
FOXN3-206ENST00000554005 SLC7A7Q9UM01 511 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 DDX49Q9Y6V7 483 aaKnown RBP4.77□□□□□ -1.65
FOXN3-206ENST00000554005 WDR81Q562E7 1941 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 DICER1Q9UPY3 1922 aaKnown RBP4.77□□□□□ -1.65
FOXN3-206ENST00000554005 LTBP1Q14766 1721 aa4.77□□□□□ -1.65
FOXN3-206ENST00000554005 FAM172BPA6NC97 362 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 NEMP2A6NFY4 417 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 PRSS44E7EML9 344 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 LMX1BO60663 402 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 UFL1O94874 794 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 TSHBP01222 138 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 SMIM18P0DKX4 95 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 FDPSP14324 419 aaKnown RBP4.76□□□□□ -1.65
FOXN3-206ENST00000554005 PAX1P15863 534 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 GNAZP19086 355 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 CD22P20273 847 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 AZGP1P25311 298 aaKnown RBP4.76□□□□□ -1.65
FOXN3-206ENST00000554005 HSPA4P34932 840 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 NPY4RP50391 375 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 ASCL1P50553 236 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 PDX1P52945 283 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 MAPK12P53778 367 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 POLR2LP62875 67 aaKnown RBP4.76□□□□□ -1.65
FOXN3-206ENST00000554005 TRDNQ13061 729 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 PPIGQ13427 754 aaKnown RBP eCLIP4.76□□□□□ -1.656e-8■□□□□ 10.1
FOXN3-206ENST00000554005 ZNF273Q14593 569 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 CAVIN4Q5BKX8 364 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 WDR38Q5JTN6 314 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 ELFN2Q5R3F8 820 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 STPG1Q5TH74 334 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 C16orf87Q6PH81 154 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 PPP1R21Q6ZMI0 780 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 ERN2Q76MJ5 926 aaKnown RBP4.76□□□□□ -1.65
FOXN3-206ENST00000554005 NUP54Q7Z3B4 507 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 ARHGAP22Q7Z5H3 698 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 KRT77Q7Z794 578 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 MFN1Q8IWA4 741 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 IQCF2Q8IXL9 164 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 THNSL1Q8IYQ7 743 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 LMNTD1Q8N9Z9 388 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 OR1J1Q8NGS3 322 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 CCDC107Q8WV48 283 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 ARAP2Q8WZ64 1704 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 HSD17B8Q92506 261 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 MOB3AQ96BX8 217 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 STAMBPL1Q96FJ0 436 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 SIPA1Q96FS4 1042 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 OTUB1Q96FW1 271 aaPredicted RBP4.76□□□□□ -1.65
FOXN3-206ENST00000554005 FEVQ99581 238 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 VPS33BQ9H267 617 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 DUOX1Q9NRD9 1551 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 COQ3Q9NZJ6 369 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.76□□□□□ -1.65
FOXN3-206ENST00000554005 KIF3AQ9Y496 699 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 RFX7Q2KHR2 1363 aa4.76□□□□□ -1.65
FOXN3-206ENST00000554005 A0A1B0GUL6 1792 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms