RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 IQGAP1P46940 1657 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 FAM135AQ9P2D6 1515 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 TMEM94Q12767 1356 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 PZPP20742 1482 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 ARHGAP35Q9NRY4 1499 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 LRRIQ1Q96JM4 1722 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 SYNMO15061 1565 aa3.21□□□□□ -1.89
SCFD1-210ENST00000553693 XIRP1Q702N8 1843 aaKnown RBP3.21□□□□□ -1.89
SCFD1-210ENST00000553693 FMN1Q68DA7 1419 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 GPATCH8Q9UKJ3 1502 aaKnown RBP3.21□□□□□ -1.9
SCFD1-210ENST00000553693 A0A087WUV0 522 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-210ENST00000553693 FSD2A1L4K1 749 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 K7ENM7 598 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 IGHV2-70P01814 119 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 CSH1P0DML2 217 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 CSH2P0DML3 217 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 GP1BBP13224 206 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 HOXD13P35453 343 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 CAPGP40121 348 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 XGP55808 180 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 IRX4P78413 519 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 NUCB1Q02818 461 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 MTF1Q14872 753 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 WTAPQ15007 396 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 TOMM20Q15388 145 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 SNAPC1Q16533 368 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 CBWD6Q4V339 395 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 CBWD3Q5JTY5 395 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 CHMP1BQ7LBR1 199 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 ZFAND4Q86XD8 727 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 NPRL2Q8WTW4 380 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 PIGBQ92521 554 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 JAKMIP2Q96AA8 810 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 CALML4Q96GE6 196 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 PSMB7Q99436 277 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 SDF4Q9BRK5 362 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 MTHFD2LQ9H903 347 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-210ENST00000553693 SLC35C2Q9NQQ7 365 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 CFDP1Q9UEE9 299 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-210ENST00000553693 VPS28Q9UK41 221 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 R4GN57 208 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 LRP6O75581 1613 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 DHX29Q7Z478 1369 aaKnown RBP3.21□□□□□ -1.9
SCFD1-210ENST00000553693 JCADQ9P266 1359 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 CDC42BPAQ5VT25 1732 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 KAT6BQ8WYB5 2073 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 NLRP1Q9C000 1473 aa3.21□□□□□ -1.9
SCFD1-210ENST00000553693 INO80Q9ULG1 1556 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-210ENST00000553693 ZC3H13Q5T200 1668 aaKnown RBP3.2□□□□□ -1.9
SCFD1-210ENST00000553693 ROBO1Q9Y6N7 1651 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 KIAA1107Q9UPP5 1409 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 NEMP2A6NFY4 417 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 IGKV3-15P01624 115 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 IRF2P14316 349 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 DNASE1P24855 282 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 PDHA2P29803 388 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 DNA2P51530 1060 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 UBXN2AP68543 259 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 SGCGQ13326 291 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 BAATQ14032 418 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-210ENST00000553693 MFSD4BQ5TF39 518 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 PRR27Q6MZM9 219 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 MFSD12Q6NUT3 480 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 CFAP161Q6P656 301 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 GDPGP1Q6ZNW5 385 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 HPS6Q86YV9 775 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 ZNF595Q8IYB9 648 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-210ENST00000553693 ATP8B4Q8TF62 1192 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 CHPT1Q8WUD6 406 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 SNRNP27Q8WVK2 155 aaKnown RBP3.2□□□□□ -1.9
SCFD1-210ENST00000553693 TOMM40LQ969M1 308 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 NSUN4Q96CB9 384 aaKnown RBP3.2□□□□□ -1.9
SCFD1-210ENST00000553693 ATXN7L3BQ96GX2 97 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 OVOL2Q9BRP0 275 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 TDRD1Q9BXT4 1180 aaKnown RBP3.2□□□□□ -1.9
SCFD1-210ENST00000553693 ZMYND12Q9H0C1 365 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 TLE6Q9H808 572 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 GPN1Q9HCN4 374 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-210ENST00000553693 BLOC1S4Q9NUP1 217 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 GPR83Q9NYM4 423 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 PPIEQ9UNP9 301 aaKnown RBP3.2□□□□□ -1.9
SCFD1-210ENST00000553693 ZNF510Q9Y2H8 683 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 SELENOKQ9Y6D0 94 aa3.2□□□□□ -1.9
SCFD1-210ENST00000553693 KDM5DQ9BY66 1539 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 A0A1W2PNU3 283 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-210ENST00000553693 GLOD5A6NK44 160 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 A8MXK9 166 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 LINGO3P0C6S8 592 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 PFKFB1P16118 471 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 OXTRP30559 389 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 ITGA7Q13683 1181 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 TRIM29Q14134 588 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 C15orf32Q32M92 178 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 MCMDC2Q4G0Z9 681 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 CFAP58Q5T655 872 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 LCLAT1Q6UWP7 414 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 NUP54Q7Z3B4 507 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 MARCH9Q86YJ5 346 aa3.19□□□□□ -1.9
SCFD1-210ENST00000553693 ZNF584Q8IVC4 421 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms