RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.86□□□□□ -1.63
VTI1B-202ENST00000553619 CD244Q9BZW8 370 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 UNKQ9C0B0 810 aaKnown RBP4.86□□□□□ -1.63
VTI1B-202ENST00000553619 WWP1Q9H0M0 922 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 PCBD2Q9H0N5 130 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 OR52A5Q9H2C5 316 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 C12orf65Q9H3J6 166 aaKnown RBP4.86□□□□□ -1.63
VTI1B-202ENST00000553619 OSGEPL1Q9H4B0 414 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 SLC32A1Q9H598 525 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 ERVMER34-1Q9H9K5 563 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 EBF2Q9HAK2 575 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 TM9SF3Q9HD45 589 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 CD93Q9NPY3 652 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 MRGBPQ9NV56 204 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 WWOXQ9NZC7 414 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 SPATA7Q9P0W8 599 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 OPTCQ9UBM4 332 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 SLC23A2Q9UGH3 650 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 PTBP2Q9UKA9 531 aaKnown RBP4.86□□□□□ -1.63
VTI1B-202ENST00000553619 RAB23Q9ULC3 237 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 CDYLQ9Y232 598 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 PDE10AQ9Y233 779 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 APOBEC2Q9Y235 224 aaKnown RBP4.86□□□□□ -1.63
VTI1B-202ENST00000553619 DNAJC16Q9Y2G8 782 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 RAP2CQ9Y3L5 183 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 PCDHGA2Q9Y5H1 932 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 CACNA1IQ9P0X4 2223 aa4.86□□□□□ -1.63
VTI1B-202ENST00000553619 TNRC18O15417 2968 aaPredicted RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 A0A1W2PR77 199 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 TRPC5OSA6NMA1 111 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 K7EPI3 171 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 UBXN8O00124 270 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 NDUFAB1O14561 156 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 HGSO14964 777 aaPredicted RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 CCNT2O60583 730 aaKnown RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 SNNO75324 88 aaPredicted RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 CRCPO75575 148 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 TOP3BO95985 862 aaKnown RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 OTCP00480 354 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 VIPP01282 170 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 FUCA1P04066 466 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 ANXA6P08133 673 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 FGF4P08620 206 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 EBLN1P0CF75 366 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 F3P13726 295 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 MTHFD2P13995 350 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 HRH2P25021 359 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 CXCR2P25025 360 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 CALRP27797 417 aaKnown RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 ACADLP28330 430 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 EEF1DP29692 281 aaKnown RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 ACTR1BP42025 376 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 LIMS1P48059 325 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 KCNC1P48547 511 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 ARRB1P49407 418 aaPredicted RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 CCNG1P51959 295 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 PGGT1BP53609 377 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 PKNOX1P55347 436 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 ACTR1AP61163 376 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 ZNF33BQ06732 778 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 DMTNQ08495 405 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 BST1Q10588 318 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 CDC16Q13042 620 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 EIF2B5Q13144 721 aaKnown RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 BIRC2Q13490 618 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 GTF2H2Q13888 395 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 SIM2Q14190 667 aaPredicted RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 FZD2Q14332 565 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 OR4D1Q15615 310 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 DPY19L1Q2PZI1 675 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 ALG11Q2TAA5 492 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 PLK5Q496M5 336 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 ZNF658BQ4V348 819 aaPredicted RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 UNC50Q53HI1 259 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 LIPJQ5W064 366 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 PMS2CLQ68D20 193 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 CAPN13Q6MZZ7 669 aaPredicted RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 GTF2H2CQ6P1K8 395 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 AGTRAPQ6RW13 159 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 TSSK4Q6SA08 328 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 SBSNQ6UWP8 590 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 NAPRTQ6XQN6 538 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 LRRC70Q7Z2Q7 622 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 MILR1Q7Z6M3 343 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 SPATS2Q86XZ4 545 aaKnown RBP4.85□□□□□ -1.63
VTI1B-202ENST00000553619 RASGRP3Q8IV61 690 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 VRK3Q8IV63 474 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 DCUN1D3Q8IWE4 304 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 TRIM48Q8IWZ4 208 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 SYTL1Q8IYJ3 562 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 FRMD1Q8N878 549 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 TMEM105Q8N8V8 129 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 LINC01356Q8N9X3 169 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 OR6Y1Q8NGX8 325 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 OR5K2Q8NHB8 316 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 UBTD2Q8WUN7 234 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 OR1E3Q8WZA6 343 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 NELL1Q92832 810 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 PPP1R14AQ96A00 147 aa4.85□□□□□ -1.63
VTI1B-202ENST00000553619 SLC22A18Q96BI1 424 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms