RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 KCNJ13O60928 360 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 GMNNO75496 209 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 PAPSS2O95340 614 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-208ENST00000553278 PRG2P13727 222 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 AHRP35869 848 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 ARCN1P48444 511 aaKnown RBP5.38□□□□□ -1.55
SCFD1-208ENST00000553278 PEX5P50542 639 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 MTTPP55157 894 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 SSTP61278 116 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 ZNF155Q12901 538 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-208ENST00000553278 PDZK1IP1Q13113 114 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 GIT2Q14161 759 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 GK2Q14410 553 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-208ENST00000553278 KIR2DS5Q14953 304 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 ODF3L2Q3SX64 289 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 PHLDA2Q53GA4 152 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 KLHL10Q6JEL2 608 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 TTC27Q6P3X3 843 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 PIP4P1Q86T03 277 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 LONP2Q86WA8 852 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 TMEM139Q8IV31 216 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 STHQ8IWL8 128 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 ADHFE1Q8IWW8 467 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 CDK20Q8IZL9 346 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 PGBD5Q8N414 524 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 SIDT2Q8NBJ9 832 aaKnown RBP5.38□□□□□ -1.55
SCFD1-208ENST00000553278 OR11H4Q8NGC9 324 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 OR56B1Q8NGI3 324 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 OR4A16Q8NH70 328 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 SLC20A1Q8WUM9 679 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 ARHGAP45Q92619 1136 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 HAS2Q92819 552 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 TMEM19Q96HH6 336 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 EBF3Q9H4W6 596 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.38□□□□□ -1.555e-6■■■■□ 22.2
SCFD1-208ENST00000553278 HIF1ANQ9NWT6 349 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 SMARCAL1Q9NZC9 954 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 ZNF224Q9NZL3 707 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 NDUFA13Q9P0J0 144 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 WDR37Q9Y2I8 494 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 CKAP5Q14008 2032 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 A0A087WZY1 265 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 A0A1B0GWJ7 208 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 RIPK2O43353 540 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 IDH1O75874 414 aaKnown RBP5.37□□□□□ -1.55
SCFD1-208ENST00000553278 KDM4BO94953 1096 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 OPN1MWP04001 364 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 KRT6BP04259 564 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 OPN1MW2P0DN77 364 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 OPN1MW3P0DN78 364 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 HSPA1LP34931 641 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 SFTPDP35247 375 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 NKX2-1P43699 371 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-208ENST00000553278 KRT6CP48668 564 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 NR0B1P51843 470 aaKnown RBP5.37□□□□□ -1.55
SCFD1-208ENST00000553278 FKBP1BP68106 108 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 ABATP80404 500 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 CCZ1BP86790 482 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 CCZ1P86791 482 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-208ENST00000553278 PMP22Q01453 160 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 TRAF2Q12933 501 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 CEP55Q53EZ4 464 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 ARMCX4Q5H9R4 360 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 CTR9Q6PD62 1173 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 CASC1Q6TDU7 716 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 ASB18Q6ZVZ8 466 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 ARMCX2Q7L311 632 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 SLC16A9Q7RTY1 509 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 FJX1Q86VR8 437 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 AMZ2Q86W34 360 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 ZNF548Q8NEK5 533 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-208ENST00000553278 OR10Q1Q8NGQ4 319 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 U2AF1L4Q8WU68 220 aaKnown RBP5.37□□□□□ -1.55
SCFD1-208ENST00000553278 RFT1Q96AA3 541 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 PRMT1Q99873 361 aaKnown RBP5.37□□□□□ -1.55
SCFD1-208ENST00000553278 TPPP3Q9BW30 176 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 WWTR1Q9GZV5 400 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 RBM38Q9H0Z9 239 aaKnown RBP5.37□□□□□ -1.55
SCFD1-208ENST00000553278 TRPV6Q9H1D0 765 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 ZDHHC6Q9H6R6 413 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 RNF121Q9H920 327 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 HOMER3Q9NSC5 361 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 FAM153AQ9UHL3 310 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 INSL5Q9Y5Q6 135 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 HS3ST3A1Q9Y663 406 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 IL16Q14005 1332 aa5.37□□□□□ -1.55
SCFD1-208ENST00000553278 M0R296 226 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 TNFRSF13BO14836 293 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-208ENST00000553278 ACSL4O60488 711 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 LDB3O75112 727 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 PALMO75781 387 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 GRAP2O75791 330 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 APBB3O95704 486 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 KRT3P12035 628 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 PRF1P14222 555 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 FUT1P19526 365 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 AKT2P31751 481 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 SOX6P35712 828 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 MMP13P45452 471 aa5.36□□□□□ -1.55
SCFD1-208ENST00000553278 PITPNBP48739 271 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms