RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 JUNDP17535 347 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 TNFRSF1BP20333 461 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 SLC6A4P31645 630 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 RGS4P49798 205 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 CLCN7P51798 805 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 YBEYP58557 167 aaPredicted RBP11.98□□□□□ -0.49
HDAC7-230ENST00000552960 WDR5P61964 334 aaKnown RBP11.98□□□□□ -0.49
HDAC7-230ENST00000552960 PLD1Q13393 1074 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 PCBP2Q15366 365 aaKnown RBP eCLIP11.98□□□□□ -0.49
HDAC7-230ENST00000552960 USP39Q53GS9 565 aaKnown RBP11.98□□□□□ -0.49
HDAC7-230ENST00000552960 ATG9BQ674R7 924 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 KDM4DQ6B0I6 523 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 SNX20Q7Z614 316 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 TSPYL5Q86VY4 417 aaPredicted RBP11.98□□□□□ -0.49
HDAC7-230ENST00000552960 NLGN4XQ8N0W4 816 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 TCAIMQ8N3R3 496 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 GLB1L3Q8NCI6 653 aaPredicted RBP11.98□□□□□ -0.49
HDAC7-230ENST00000552960 LKAAEAR1Q8TD35 194 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 IL1RAPQ9NPH3 570 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 CXXC1Q9P0U4 656 aaPredicted RBP11.98□□□□□ -0.49
HDAC7-230ENST00000552960 DOCK4Q8N1I0 1966 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 METTL15A6NJ78 407 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 SAGE2PA6NJ88 616 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 LOC110117498-PIK3R3F6TDL0 507 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 MANBAO00462 879 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 AP3D1O14617 1153 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 ERN1O75460 977 aaKnown RBP11.98□□□□□ -0.49
HDAC7-230ENST00000552960 ESR1P03372 595 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 HMGA1P17096 107 aaKnown RBP11.98□□□□□ -0.49
HDAC7-230ENST00000552960 ENGP17813 658 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 FPR1P21462 350 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 PTGER3P43115 390 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 NRIP1P48552 1158 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 LBX1P52954 281 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 OR2B6P58173 313 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 DEFA1P59665 94 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 DEFA3P59666 94 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 MED22Q15528 200 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 SF1Q15637 639 aaKnown RBP11.98□□□□□ -0.49
HDAC7-230ENST00000552960 ZNF181Q2M3W8 571 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 CYP27C1Q4G0S4 372 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 SLC8B1Q6J4K2 584 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 CAPN13Q6MZZ7 669 aaPredicted RBP11.98□□□□□ -0.49
HDAC7-230ENST00000552960 CNKSR3Q6P9H4 555 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 ZNF551Q7Z340 670 aaPredicted RBP11.98□□□□□ -0.49
HDAC7-230ENST00000552960 ENTHD1Q8IYW4 607 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 CHPFQ8IZ52 775 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 SPATA17Q96L03 361 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 TOX2Q96NM4 488 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 CPPED1Q9BRF8 314 aaPredicted RBP11.98□□□□□ -0.49
HDAC7-230ENST00000552960 ASB8Q9H765 288 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 TLR8Q9NR97 1041 aaKnown RBP11.98□□□□□ -0.49
HDAC7-230ENST00000552960 RAD18Q9NS91 495 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 FNIP2Q9P278 1114 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 ZNF221Q9UK13 617 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 DHRS7Q9Y394 339 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 CCL27Q9Y4X3 112 aa11.98□□□□□ -0.49
HDAC7-230ENST00000552960 ISPDA4D126 451 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 FAM220BPB1ANY3 271 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 CLIC1O00299 241 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 CTDSP2O14595 271 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 CCNDBP1O95273 360 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 PDYNP01213 254 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 KLKB1P03952 638 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 HOXD9P28356 352 aaPredicted RBP11.97□□□□□ -0.49
HDAC7-230ENST00000552960 ZC3H12BQ5HYM0 836 aaKnown RBP11.97□□□□□ -0.49
HDAC7-230ENST00000552960 SERPINA9Q86WD7 417 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 BCL7BQ9BQE9 202 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 TMEM175Q9BSA9 504 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 BBS2Q9BXC9 721 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 TM6SF2Q9BZW4 377 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 MAGIXQ9H6Y5 334 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 TM9SF3Q9HD45 589 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 GPSM3Q9Y4H4 160 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 M0R082 166 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 COCHO43405 550 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 OPN1SWP03999 348 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 BMP1P13497 986 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 GJA1P17302 382 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 ABHD18Q0P651 414 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 KEAP1Q14145 624 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 TAB1Q15750 504 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 NDUFA5Q16718 116 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 ARMCX4Q5H9R4 360 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 ZNF648Q5T619 568 aaPredicted RBP11.97□□□□□ -0.49
HDAC7-230ENST00000552960 DENND1CQ8IV53 801 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 UBE2J2Q8N2K1 259 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 MAL2Q969L2 176 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 CDADC1Q9BWV3 514 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 EMILIN2Q9BXX0 1053 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 ADGRE3Q9BY15 652 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 ACPTQ9BZG2 426 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 NDRG4Q9ULP0 352 aaKnown RBP11.97□□□□□ -0.49
HDAC7-230ENST00000552960 UGT2A1Q9Y4X1 527 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 PCDHGB6Q9Y5F9 930 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 PIKFYVEQ9Y2I7 2098 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 GON4LQ3T8J9 2241 aa11.97□□□□□ -0.49
HDAC7-230ENST00000552960 PABPN1LA6NDY0 278 aaKnown RBP11.96□□□□□ -0.49
HDAC7-230ENST00000552960 DSCR3O14972 297 aa11.96□□□□□ -0.49
HDAC7-230ENST00000552960 ZW10O43264 779 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms