RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 ESRRAP11474 423 aaPredicted RBP8.29□□□□□ -1.08
TMEM116-217ENST00000552801 PAMP19021 973 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 ELAVL4P26378 380 aaKnown RBP8.29□□□□□ -1.08
TMEM116-217ENST00000552801 AVPR1BP47901 424 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 BASP1P80723 227 aaKnown RBP8.29□□□□□ -1.08
TMEM116-217ENST00000552801 SARNPP82979 210 aaKnown RBP8.29□□□□□ -1.08
TMEM116-217ENST00000552801 EEF1A2Q05639 463 aaKnown RBP8.29□□□□□ -1.08
TMEM116-217ENST00000552801 ZRSR2Q15696 482 aaKnown RBP8.29□□□□□ -1.08
TMEM116-217ENST00000552801 INAQ16352 499 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 NDUFA9Q16795 377 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 TTLL9Q3SXZ7 439 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 ANKRD20A4Q4UJ75 823 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 THEMIS2Q5TEJ8 643 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 C1QL3Q5VWW1 255 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 FAAH2Q6GMR7 532 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 C4orf22Q6V702 233 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 MICALCLQ6ZW33 695 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 IFT20Q8IY31 132 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 SIRT6Q8N6T7 355 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 CSNK1A1LQ8N752 337 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 OR2L3Q8NG85 312 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 SLC35B2Q8TB61 432 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 MCOLN3Q8TDD5 553 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 ACTRT1Q8TDG2 376 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 ATG4AQ8WYN0 398 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 ZNF775Q96BV0 537 aaPredicted RBP8.29□□□□□ -1.08
TMEM116-217ENST00000552801 C8orf44Q96CB5 159 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 MMABQ96EY8 250 aaPredicted RBP8.29□□□□□ -1.08
TMEM116-217ENST00000552801 ACAT2Q9BWD1 397 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 IL22Q9GZX6 179 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 CCDC68Q9H2F9 335 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 SLC22A11Q9NSA0 550 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 C14orf105Q9NVL8 296 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 DRG1Q9Y295 367 aaKnown RBP8.29□□□□□ -1.08
TMEM116-217ENST00000552801 R3HDM2Q9Y2K5 976 aaKnown RBP8.29□□□□□ -1.08
TMEM116-217ENST00000552801 RRP15Q9Y3B9 282 aaKnown RBP8.29□□□□□ -1.08
TMEM116-217ENST00000552801 PCSK5Q92824 1860 aa8.29□□□□□ -1.08
TMEM116-217ENST00000552801 ZGRF1Q86YA3 2104 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 SVILO95425 2214 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 DIDO1Q9BTC0 2240 aaKnown RBP8.28□□□□□ -1.08
TMEM116-217ENST00000552801 NOTCH2Q04721 2471 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 FITM1A5D6W6 292 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 PABPN1LA6NDY0 278 aaKnown RBP8.28□□□□□ -1.08
TMEM116-217ENST00000552801 IDSB3KWA1 339 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 MYO1CO00159 1063 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 EIF3HO15372 352 aaKnown RBP eCLIP8.28□□□□□ -1.08
TMEM116-217ENST00000552801 LIASO43766 372 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 SUN1O94901 812 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 RASAL1O95294 804 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 BMP10O95393 424 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 ONECUT2O95948 504 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 SERPINA7P05543 415 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 PSMB5P28074 263 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 FMO4P31512 558 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 HSD17B2P37059 387 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 SCTRP47872 440 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 NPY2RP49146 381 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.28□□□□□ -1.08
TMEM116-217ENST00000552801 VWA2Q5GFL6 755 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 SP5Q6BEB4 398 aaPredicted RBP8.28□□□□□ -1.08
TMEM116-217ENST00000552801 FRMPD2BQ6IN97 320 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 RPUSD3Q6P087 351 aaKnown RBP8.28□□□□□ -1.08
TMEM116-217ENST00000552801 CASC4Q6P4E1 433 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 IGFL2Q6UWQ7 119 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 RIPOR1Q6ZS17 1223 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 COX15Q7KZN9 410 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 RASGEF1CQ8N431 466 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 CATSPER1Q8NEC5 780 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 LKAAEAR1Q8TD35 194 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 BRIX1Q8TDN6 353 aaKnown RBP8.28□□□□□ -1.08
TMEM116-217ENST00000552801 C1orf54Q8WWF1 131 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 SMPDL3AQ92484 453 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 MVB12AQ96EY5 273 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 PBKQ96KB5 322 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 BARD1Q99728 777 aaKnown RBP8.28□□□□□ -1.08
TMEM116-217ENST00000552801 EBNA1BP2Q99848 306 aaKnown RBP8.28□□□□□ -1.08
TMEM116-217ENST00000552801 DPH7Q9BTV6 452 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 FAM107BQ9H098 131 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 MKKSQ9NPJ1 570 aaPredicted RBP8.28□□□□□ -1.08
TMEM116-217ENST00000552801 CHRAC1Q9NRG0 131 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 PLA2G3Q9NZ20 509 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 SAMD15Q9P1V8 674 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 SEC14L3Q9UDX4 400 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 C19orf25Q9UFG5 118 aaPredicted RBP8.28□□□□□ -1.08
TMEM116-217ENST00000552801 SH3BGRL2Q9UJC5 107 aa8.28□□□□□ -1.08
TMEM116-217ENST00000552801 TEX15Q9BXT5 2789 aa8.27□□□□□ -1.08
TMEM116-217ENST00000552801 VSTM2BA6NLU5 285 aa8.27□□□□□ -1.09
TMEM116-217ENST00000552801 POM121CA8CG34 1229 aa8.27□□□□□ -1.09
TMEM116-217ENST00000552801 A8MUI8 341 aa8.27□□□□□ -1.09
TMEM116-217ENST00000552801 H0YGG7 62 aa8.27□□□□□ -1.09
TMEM116-217ENST00000552801 CCDC188H7C350 402 aa8.27□□□□□ -1.09
TMEM116-217ENST00000552801 CCL21O00585 134 aa8.27□□□□□ -1.09
TMEM116-217ENST00000552801 CTSVO60911 334 aa8.27□□□□□ -1.09
TMEM116-217ENST00000552801 KLHL18O94889 574 aa8.27□□□□□ -1.09
TMEM116-217ENST00000552801 UNC5CO95185 931 aa8.27□□□□□ -1.09
TMEM116-217ENST00000552801 F10P00742 488 aa8.27□□□□□ -1.09
TMEM116-217ENST00000552801 PRR35P0CG20 571 aa8.27□□□□□ -1.09
TMEM116-217ENST00000552801 COX6B1P14854 86 aa8.27□□□□□ -1.09
TMEM116-217ENST00000552801 RPS3P23396 243 aaKnown RBP eCLIP8.27□□□□□ -1.09
TMEM116-217ENST00000552801 PSMA3P25788 255 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms