RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 SLCO5A1Q9H2Y9 848 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 PIGMQ9H3S5 423 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 CNOT10Q9H9A5 744 aaKnown RBP3.68□□□□□ -1.82
LIMA1-208ENST00000551691 MOV10Q9HCE1 1003 aaKnown RBP3.68□□□□□ -1.82
LIMA1-208ENST00000551691 STARD5Q9NSY2 213 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 ANKRD10Q9NXR5 420 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 WSB2Q9NYS7 404 aaPredicted RBP3.68□□□□□ -1.82
LIMA1-208ENST00000551691 OR14J1Q9UGF5 321 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 RCOR1Q9UKL0 485 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 CCL26Q9Y258 94 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 PAM16Q9Y3D7 125 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 SLCO1B1Q9Y6L6 691 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.68□□□□□ -1.82
LIMA1-208ENST00000551691 MED13Q9UHV7 2174 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 A0A1B0GVM2 712 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 HTR3EA5X5Y0 456 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 OR6C76A6NM76 312 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 ANXA2P2A6NMY6 339 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 TARM1B6A8C7 271 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 MAP2K7O14733 419 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 SLC16A5O15375 505 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 TSPAN1O60635 241 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 FMO6PO60774 539 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 KERAO60938 352 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 SLCO2B1O94956 709 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 NDUFB4O95168 129 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 VIMP08670 466 aaKnown RBP3.67□□□□□ -1.82
LIMA1-208ENST00000551691 ENO3P13929 434 aaPredicted RBP3.67□□□□□ -1.82
LIMA1-208ENST00000551691 AGAP20933 346 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 CHATP28329 748 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 KIF5BP33176 963 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 SOAT1P35610 550 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 SLC26A2P50443 739 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 ALDH3A2P51648 485 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 SUOXP51687 545 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 SIRPAP78324 504 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 ARF5P84085 180 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 PPP2R2BQ00005 443 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 HSPB3Q12988 150 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 UGCGQ16739 394 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 FAM98BQ52LJ0 330 aaKnown RBP3.67□□□□□ -1.82
LIMA1-208ENST00000551691 ENTPD8Q5MY95 495 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 MPP7Q5T2T1 576 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 PRAMEF17Q5VTA0 474 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 TMEM198Q66K66 360 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 MIS18BP1Q6P0N0 1132 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 METTL2BQ6P1Q9 378 aaKnown RBP3.67□□□□□ -1.82
LIMA1-208ENST00000551691 SUSD1Q6UWL2 747 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 ZNF793Q6ZN11 406 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 INTS8Q75QN2 995 aaKnown RBP3.67□□□□□ -1.82
LIMA1-208ENST00000551691 DPPA4Q7L190 304 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 ITPRIPQ8IWB1 547 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 GPR65Q8IYL9 337 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 ALLCQ8N6M5 410 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 ANKRD20A12PQ8NF67 263 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 CFAP61Q8NHU2 1237 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 ZNF461Q8TAF7 563 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 WIPF2Q8TF74 440 aaPredicted RBP3.67□□□□□ -1.82
LIMA1-208ENST00000551691 IGSF8Q969P0 613 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 METTL2AQ96IZ6 378 aaKnown RBP3.67□□□□□ -1.82
LIMA1-208ENST00000551691 SLC41A2Q96JW4 573 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 RMDN2Q96LZ7 410 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 NAP1L5Q96NT1 182 aaPredicted RBP3.67□□□□□ -1.82
LIMA1-208ENST00000551691 SEPHS2Q99611 448 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 FAM110AQ9BQ89 295 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 LINC00597Q9H2U6 94 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 KCNK15Q9H427 330 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 NXF3Q9H4D5 531 aaKnown RBP3.67□□□□□ -1.82
LIMA1-208ENST00000551691 LY9Q9HBG7 655 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 PNRC2Q9NPJ4 139 aaKnown RBP3.67□□□□□ -1.82
LIMA1-208ENST00000551691 HINT3Q9NQE9 182 aaKnown RBP3.67□□□□□ -1.82
LIMA1-208ENST00000551691 CYSLTR2Q9NS75 346 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 AGPAT5Q9NUQ2 364 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 AKAP7Q9P0M2 348 aaPredicted RBP3.67□□□□□ -1.82
LIMA1-208ENST00000551691 SLC17A6Q9P2U8 582 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 HEY2Q9UBP5 337 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 DNAJB9Q9UBS3 223 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 HOOK1Q9UJC3 728 aaKnown RBP3.67□□□□□ -1.82
LIMA1-208ENST00000551691 TTC7AQ9ULT0 858 aaPredicted RBP3.67□□□□□ -1.82
LIMA1-208ENST00000551691 INSL5Q9Y5Q6 135 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 EPN1Q9Y6I3 576 aaPredicted RBP3.67□□□□□ -1.82
LIMA1-208ENST00000551691 SDK2Q58EX2 2172 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 APCP25054 2843 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 SF3B1O75533 1304 aaKnown RBP eCLIP3.67□□□□□ -1.828e-6■■■■■ 107
LIMA1-208ENST00000551691 NFASCO94856 1347 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 CNTNAP2Q9UHC6 1331 aa3.67□□□□□ -1.82
LIMA1-208ENST00000551691 ARHGEF17Q96PE2 2063 aaPredicted RBP3.66□□□□□ -1.82
LIMA1-208ENST00000551691 SVILO95425 2214 aa3.66□□□□□ -1.82
LIMA1-208ENST00000551691 NBEAL1Q6ZS30 2694 aa3.66□□□□□ -1.82
LIMA1-208ENST00000551691 A0A0B4J293 547 aa3.66□□□□□ -1.82
LIMA1-208ENST00000551691 A0A1B0GVT2 93 aa3.66□□□□□ -1.82
LIMA1-208ENST00000551691 E9PAM4 449 aa3.66□□□□□ -1.82
LIMA1-208ENST00000551691 K7ENP7 123 aa3.66□□□□□ -1.82
LIMA1-208ENST00000551691 PLRG1O43660 514 aaKnown RBP3.66□□□□□ -1.82
LIMA1-208ENST00000551691 CRCPO75575 148 aa3.66□□□□□ -1.82
LIMA1-208ENST00000551691 STBD1O95210 358 aa3.66□□□□□ -1.82
LIMA1-208ENST00000551691 VNN2O95498 520 aa3.66□□□□□ -1.82
LIMA1-208ENST00000551691 KLF8O95600 359 aaPredicted RBP3.66□□□□□ -1.82
LIMA1-208ENST00000551691 PNPP00491 289 aa3.66□□□□□ -1.82
LIMA1-208ENST00000551691 ZFYP08048 801 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms