RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, human

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-223	ENST00000550442	CHIT1	Q13231	466 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	TEAD4	Q15561	434 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	DUOXA1	Q1HG43	343 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	RABL3	Q5HYI8	236 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	RNF220	Q5VTB9	566 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	ACSM2B	Q68CK6	577 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	HMBOX1	Q6NT76	420 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	SLC2A7	Q6PXP3	512 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	AGTRAP	Q6RW13	159 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	B3GNT6	Q6ZMB0	384 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442		Q6ZVL8	140 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	IKBIP	Q70UQ0	350 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	GET4	Q7L5D6	327 aa	Predicted RBP	11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	THOC6	Q86W42	341 aa	Known RBP	11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	CPA6	Q8N4T0	437 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	CBR4	Q8N4T8	237 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	CHST14	Q8NCH0	376 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	ZNF548	Q8NEK5	533 aa	Predicted RBP	11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	WDR20	Q8TBZ3	569 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	NAT14	Q8WUY8	206 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	SMG7	Q92540	1137 aa	Known RBP	11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	SMARCD2	Q92925	531 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	TCEAL4	Q96EI5	215 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	FAM120B	Q96EK7	910 aa	Known RBP	11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	DTNBP1	Q96EV8	351 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	TMEM74	Q96NL1	305 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	P2RY13	Q9BPV8	354 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	YIPF3	Q9GZM5	350 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	RPF2	Q9H7B2	306 aa	Known RBP	11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	FBRS	Q9HAH7	460 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	LTB4R2	Q9NPC1	389 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	PRMT8	Q9NR22	394 aa	Predicted RBP	11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	DCAF13	Q9NV06	445 aa	Known RBP	11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	UBAP1	Q9NZ09	502 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	TMPRSS11E	Q9UL52	423 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	SLC22A14	Q9Y267	594 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	ORC6	Q9Y5N6	252 aa		11.43	□□□□□ -0.58
LETMD1-223	ENST00000550442	SPEG	Q15772	3267 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	CXCR6	O00574	342 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	RFXANK	O14593	260 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	ACOX3	O15254	700 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	TSPAN6	O43657	245 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	BNIP3L	O60238	219 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	KDM1A	O60341	852 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	ALB	P02768	609 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	CYP17A1	P05093	508 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	GJA1	P17302	382 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	GPX2	P18283	190 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	CDH2	P19022	906 aa	Predicted RBP	11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	EPOR	P19235	508 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	GSTM2	P28161	218 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	GSTT1	P30711	240 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	GDF5	P43026	501 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	ARFIP1	P53367	373 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	RAD23A	P54725	363 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	MYBPC1	Q00872	1141 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	CTBS	Q01459	385 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	TUBA3C	Q13748	450 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	ACOX1	Q15067	660 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	PTPRR	Q15256	657 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	NRF1	Q16656	503 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	SLC44A4	Q53GD3	710 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	XKR6	Q5GH73	641 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	RBM48	Q5RL73	367 aa	Known RBP	11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	C6orf52	Q5T4I8	152 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	MED27	Q6P2C8	311 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	TTC33	Q6PID6	262 aa	Predicted RBP	11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	SCIMP	Q6UWF3	145 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	ADAMTSL4	Q6UY14	1074 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	AMIGO2	Q86SJ2	522 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	IFNE	Q86WN2	208 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	ZC3H7A	Q8IWR0	971 aa	Known RBP	11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	RAB42	Q8N4Z0	105 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	DTWD1	Q8N5C7	304 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	RAD51AP1	Q96B01	352 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	C11orf24	Q96F05	449 aa	Predicted RBP	11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	PPM1M	Q96MI6	270 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	NELL2	Q99435	816 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	ASPSCR1	Q9BZE9	553 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	TRIM4	Q9C037	500 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	BHLHE41	Q9C0J9	482 aa	Predicted RBP	11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	PAIP1	Q9H074	479 aa	Known RBP	11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	SEMA6A	Q9H2E6	1030 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	LINC00597	Q9H2U6	94 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	NT5DC2	Q9H857	520 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	TIMMDC1	Q9NPL8	285 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	INTS7	Q9NVH2	962 aa	Known RBP	11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	HCFC1R1	Q9NWW0	138 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	VAPA	Q9P0L0	249 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	GIMAP2	Q9UG22	337 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	C3orf18	Q9UK00	162 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	DYRK1B	Q9Y463	629 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	AK5	Q9Y6K8	562 aa		11.42	□□□□□ -0.58
LETMD1-223	ENST00000550442	MGAT4D	A6NG13	374 aa		11.41	□□□□□ -0.58
LETMD1-223	ENST00000550442	TTC34	A8MYJ7	566 aa		11.41	□□□□□ -0.58
LETMD1-223	ENST00000550442		G3V2T6	193 aa		11.41	□□□□□ -0.58
LETMD1-223	ENST00000550442	CREG1	O75629	220 aa		11.41	□□□□□ -0.58
LETMD1-223	ENST00000550442	RFPL2	O75678	378 aa		11.41	□□□□□ -0.58
LETMD1-223	ENST00000550442	EPN2	O95208	641 aa		11.41	□□□□□ -0.58

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