RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	CACNA1H	O95180	2353 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	ADAMTS9	Q9P2N4	1935 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	KCNE1B	A0A087WTH5	132 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	CDX4	O14627	284 aa	Predicted RBP	11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	CAPN5	O15484	640 aa	Predicted RBP	11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	TNFSF14	O43557	240 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	OR1F1	O43749	312 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	PRAMEF4	O60810	478 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	LINC00032	P0C843	101 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	CD22	P20273	847 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	MAG	P20916	626 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	SERPINB3	P29508	390 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	GRIA3	P42263	894 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	OR1D5	P58170	312 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	RPS15A	P62244	130 aa	Known RBP	11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	CSNK1G2	P78368	415 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	BTK	Q06187	659 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	CSTF3	Q12996	717 aa	Known RBP	11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	DDX39B	Q13838	428 aa	Known RBP	11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	CLPP	Q16740	277 aa	Predicted RBP	11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	SGO1	Q5FBB7	561 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	PRAMEF9	Q5VWM5	478 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	CGB2	Q6NT52	195 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	FIGLA	Q6QHK4	219 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	WDR74	Q6RFH5	385 aa	Predicted RBP	11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	EPGN	Q6UW88	154 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	PIGW	Q7Z7B1	504 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	TRIM73	Q86UV7	250 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	NAXD	Q8IW45	347 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	LAS2	Q8IYD9	372 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	CCDC197	Q8NCU1	140 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	OR7G3	Q8NG95	312 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	OR4K1	Q8NGD4	311 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	RFWD2	Q8NHY2	731 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	FLVCR1-AS1	Q8TAF5	88 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	THAP11	Q96EK4	314 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	SEC16B	Q96JE7	1060 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	TGM7	Q96PF1	710 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	CDC6	Q99741	560 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	CENPK	Q9BS16	269 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	SEMA6C	Q9H3T2	930 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	BRF2	Q9HAW0	419 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	C1GALT1	Q9NS00	363 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	TRIM33	Q9UPN9	1127 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	BTBD3	Q9Y2F9	522 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	ARL2BP	Q9Y2Y0	163 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	TSC22D4	Q9Y3Q8	395 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	KLK4	Q9Y5K2	254 aa		11.16	□□□□□ -0.62
CNOT2-223	ENST00000550160	VCAN	P13611	3396 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	LY6G6E	A0A0G2JKS1	128 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	OR2A25	A4D2G3	310 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	PROB1	E7EW31	1015 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	FOXE1	O00358	373 aa	Predicted RBP	11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	B4GAT1	O43505	415 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	RASSF9	O75901	435 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	PDYN	P01213	254 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	RPLP0	P05388	317 aa	Known RBP	11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	GP1BA	P07359	652 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	MYF5	P13349	255 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	PIK3CB	P42338	1070 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	ARL4D	P49703	201 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	HTR6	P50406	440 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	MEF2A	Q02078	507 aa	Predicted RBP	11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	RELA	Q04206	551 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.15	□□□□□ -0.62	1e-20	■■■□□ 16.7
CNOT2-223	ENST00000550160	SQSTM1	Q13501	440 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	NR6A1	Q15406	480 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	UGT3A2	Q3SY77	523 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	ATP6AP1L	Q52LC2	224 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	ZC3H12B	Q5HYM0	836 aa	Known RBP	11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	NXN	Q6DKJ4	435 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	ZNF425	Q6IV72	752 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	C19orf47	Q8N9M1	422 aa	Known RBP	11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	TRPV3	Q8NET8	790 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	CEP70	Q8NHQ1	597 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	HUS1B	Q8NHY5	278 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	WDR48	Q8TAF3	677 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	WDR20	Q8TBZ3	569 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	IFI44	Q8TCB0	444 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	C10orf82	Q8WW14	230 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	USP7	Q93009	1102 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	ZDHHC16	Q969W1	377 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	RERG	Q96A58	199 aa	Predicted RBP	11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	TUBGCP3	Q96CW5	907 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	PPP1R36	Q96LQ0	422 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	PPP3R2	Q96LZ3	170 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	CCDC3	Q9BQI4	270 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	CCDC28B	Q9BUN5	200 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	ABCG4	Q9H172	646 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	SYNDIG1	Q9H7V2	258 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	TCF7L2	Q9NQB0	619 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	MRGBP	Q9NV56	204 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160		U3KQA8	63 aa		11.15	□□□□□ -0.62
CNOT2-223	ENST00000550160	RALGAPA1	Q6GYQ0	2036 aa		11.14	□□□□□ -0.63
CNOT2-223	ENST00000550160	MN1	Q10571	1320 aa	Predicted RBP	11.14	□□□□□ -0.63
CNOT2-223	ENST00000550160	IGKV1-8	A0A0C4DH67	115 aa		11.14	□□□□□ -0.63
CNOT2-223	ENST00000550160	GOLGA8Q	A0A0J9YX86	632 aa		11.14	□□□□□ -0.63
CNOT2-223	ENST00000550160	FEZF1	A0PJY2	475 aa		11.14	□□□□□ -0.63
CNOT2-223	ENST00000550160	SERTM1	A2A2V5	107 aa		11.14	□□□□□ -0.63
CNOT2-223	ENST00000550160	GOLGA8O	A6NCC3	632 aa		11.14	□□□□□ -0.63

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