RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 HMG20AQ9NP66 347 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 ELOVL2Q9NXB9 296 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 CAB39Q9Y376 341 aaPredicted RBP10.75□□□□□ -0.69
LINC00661-204ENST00000549354 ORC6Q9Y5N6 252 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 HTR3EA5X5Y0 456 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 AGAP14A8MT82 685 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 H0YAE9 185 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 TBX1O43435 398 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 TSPAN12O95859 305 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 PABPC1P11940 636 aaKnown RBP10.74□□□□□ -0.69
LINC00661-204ENST00000549354 MYOGP15173 224 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 RPS3P23396 243 aaKnown RBP eCLIP10.74□□□□□ -0.69
LINC00661-204ENST00000549354 GSTM2P28161 218 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 PON2Q15165 354 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 CTF1Q16619 201 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 XKR7Q5GH72 579 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 LAIR1Q6GTX8 287 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 CEP68Q76N32 757 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 C11orf96Q7Z7L8 435 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 STK40Q8N2I9 435 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 ZNF641Q96N77 438 aaPredicted RBP10.74□□□□□ -0.69
LINC00661-204ENST00000549354 ZNF347Q96SE7 839 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 OSBPL10Q9BXB5 764 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 UGT2B28Q9BY64 529 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 LINC00597Q9H2U6 94 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 TPK1Q9H3S4 243 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 SLCO3A1Q9UIG8 710 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 TRIM64A6NGJ6 449 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 ZNF99A8MXY4 864 aaPredicted RBP10.74□□□□□ -0.69
LINC00661-204ENST00000549354 SLC9A3R1O14745 358 aaPredicted RBP10.74□□□□□ -0.69
LINC00661-204ENST00000549354 LSM1O15116 133 aaKnown RBP10.74□□□□□ -0.69
LINC00661-204ENST00000549354 TPST2O60704 377 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 VPS4BO75351 444 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 OXSR1O95747 527 aaPredicted RBP10.74□□□□□ -0.69
LINC00661-204ENST00000549354 DLGAP3O95886 979 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 PGRP06401 933 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 ACPPP15309 386 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 SYN1P17600 705 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 SERPINA4P29622 427 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 HNF1BP35680 557 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 NTHL1P78549 312 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 KCNC3Q14003 757 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 RUNDC3AQ59EK9 446 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 GRASPQ7Z6J2 395 aaPredicted RBP10.74□□□□□ -0.69
LINC00661-204ENST00000549354 ZSWIM9Q86XI8 627 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 KCNJ9Q92806 393 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 PPP1R14BQ96C90 147 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 DACH2Q96NX9 599 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 ZDHHC6Q9H6R6 413 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 DNAJB9Q9UBS3 223 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 PCDHB14Q9Y5E9 798 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 CELSR3Q9NYQ7 3312 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 ATG2AQ2TAZ0 1938 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 OR7A17O14581 309 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 KLK8O60259 260 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 WDR47O94967 919 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 POP4O95707 220 aaKnown RBP10.74□□□□□ -0.69
LINC00661-204ENST00000549354 ESR1P03372 595 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 MT-ND2P03891 347 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 UGT2B4P06133 528 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 TYRP14679 529 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 CEBPBP17676 345 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 GTF2E2P29084 291 aaKnown RBP10.74□□□□□ -0.69
LINC00661-204ENST00000549354 RPS3AP61247 264 aaKnown RBP10.74□□□□□ -0.69
LINC00661-204ENST00000549354 ISL1P61371 349 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 FOXM1Q08050 763 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 GRSF1Q12849 480 aaKnown RBP eCLIP10.74□□□□□ -0.69
LINC00661-204ENST00000549354 CDK5R2Q13319 367 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 CARD16Q5EG05 197 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 COLEC12Q5KU26 742 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 ZNF362Q5T0B9 420 aaPredicted RBP10.74□□□□□ -0.69
LINC00661-204ENST00000549354 CYP4Z1Q86W10 505 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 MEX3DQ86XN8 651 aaKnown RBP10.74□□□□□ -0.69
LINC00661-204ENST00000549354 PLD3Q8IV08 490 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 SYTL1Q8IYJ3 562 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 TERB1Q8NA31 727 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 GTF2H4Q92759 462 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 SCRN2Q96FV2 425 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 PDLIM5Q96HC4 596 aaKnown RBP10.74□□□□□ -0.69
LINC00661-204ENST00000549354 MAGED4Q96JG8 741 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 BRINP2Q9C0B6 783 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 ZFYVE1Q9HBF4 777 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 ATAD3AQ9NVI7 634 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 GIN1Q9NXP7 522 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 TAS2R16Q9NYV7 291 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 TMEM9Q9P0T7 183 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 ABCG2Q9UNQ0 655 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 TESMINQ9Y4I5 508 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 HCFC2Q9Y5Z7 792 aa10.74□□□□□ -0.69
LINC00661-204ENST00000549354 A8MV72 311 aaPredicted RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 CREG1O75629 220 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 IGFBP5P24593 272 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 CLK1P49759 484 aaKnown RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 ZNF846Q147U1 533 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 LYPLAL1Q5VWZ2 237 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 DCP2Q8IU60 420 aaKnown RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 NKAPQ8N5F7 415 aaKnown RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 PAPD5Q8NDF8 572 aaKnown RBP10.73□□□□□ -0.69
LINC00661-204ENST00000549354 KCNC2Q96PR1 638 aa10.73□□□□□ -0.69
LINC00661-204ENST00000549354 PANX1Q96RD7 426 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms