RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	TUBB1	Q9H4B7	451 aa		11.75	□□□□□ -0.53
ERBB3-208	ENST00000549205	NT5DC2	Q9H857	520 aa		11.75	□□□□□ -0.53
ERBB3-208	ENST00000549205	MEAF6	Q9HAF1	191 aa		11.75	□□□□□ -0.53
ERBB3-208	ENST00000549205	KCNK13	Q9HB14	408 aa		11.75	□□□□□ -0.53
ERBB3-208	ENST00000549205	PFDN4	Q9NQP4	134 aa		11.75	□□□□□ -0.53
ERBB3-208	ENST00000549205	ANKMY1	Q9P2S6	941 aa		11.75	□□□□□ -0.53
ERBB3-208	ENST00000549205	EPHA6	Q9UF33	1036 aa		11.75	□□□□□ -0.53
ERBB3-208	ENST00000549205	ZNF490	Q9ULM2	529 aa	Predicted RBP	11.75	□□□□□ -0.53
ERBB3-208	ENST00000549205	BTRC	Q9Y297	605 aa		11.75	□□□□□ -0.53
ERBB3-208	ENST00000549205	KLHL20	Q9Y2M5	609 aa		11.75	□□□□□ -0.53
ERBB3-208	ENST00000549205	PCDHGA11	Q9Y5H2	935 aa		11.75	□□□□□ -0.53
ERBB3-208	ENST00000549205	SPTBN2	O15020	2390 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205		A0A0G2JND7	137 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	TRBC2	A0A5B9	178 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	OR2A25	A4D2G3	310 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	TLCD2	A6NGC4	264 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	NDUFAB1	O14561	156 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	CAPN5	O15484	640 aa	Predicted RBP	11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	DIAPH2	O60879	1101 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	ULK1	O75385	1050 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	MAG	P20916	626 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	CD1C	P29017	333 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	LSS	P48449	732 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	PPM1F	P49593	454 aa	Predicted RBP	11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	IDH3A	P50213	366 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	ZNF33B	Q06732	778 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.74	□□□□□ -0.53	3e-6	■□□□□ 10.9
ERBB3-208	ENST00000549205	SQSTM1	Q13501	440 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	ABRAXAS2	Q15018	415 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	AMZ1	Q400G9	498 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	AASDH	Q4L235	1098 aa	Predicted RBP	11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	SGO1	Q5FBB7	561 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	XKR7	Q5GH72	579 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	VWA5B1	Q5TIE3	1220 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	IRGC	Q6NXR0	463 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	FIGLA	Q6QHK4	219 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	WDR74	Q6RFH5	385 aa	Predicted RBP	11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	TMIGD1	Q6UXZ0	262 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	PAQR7	Q86WK9	346 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	NAXD	Q8IW45	347 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	DDIAS	Q8IXT1	998 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	ZNF740	Q8NDX6	193 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	IFI44	Q8TCB0	444 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	RHBDD1	Q8TEB9	315 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	C10orf82	Q8WW14	230 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	USP7	Q93009	1102 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	ZUFSP	Q96AP4	578 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	ZDHHC12	Q96GR4	267 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	CNDP2	Q96KP4	475 aa	Known RBP	11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	PPM1M	Q96MI6	270 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	TGM7	Q96PF1	710 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	CD180	Q99467	661 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	CCDC3	Q9BQI4	270 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	TMEM120A	Q9BXJ8	343 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	SEMA6C	Q9H3T2	930 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	ELOVL6	Q9H5J4	265 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	FARSB	Q9NSD9	589 aa	Known RBP	11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	FTSJ1	Q9UET6	329 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	HCN4	Q9Y3Q4	1203 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	TSC22D4	Q9Y3Q8	395 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	PTGDR2	Q9Y5Y4	395 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	MN1	Q10571	1320 aa	Predicted RBP	11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	SCN2A	Q99250	2005 aa		11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	NUP214	P35658	2090 aa	Predicted RBP	11.74	□□□□□ -0.53
ERBB3-208	ENST00000549205	SERTM1	A2A2V5	107 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	C4orf47	A7E2U8	309 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	SDHD	O14521	159 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	HAT1	O14929	419 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	NRP2	O60462	931 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	PDYN	P01213	254 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	C9	P02748	559 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	LINC00032	P0C843	101 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	PCNA	P12004	261 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	PVR	P15151	417 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	EZR	P15311	586 aa	Known RBP	11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	CKMT2	P17540	419 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	CDH3	P22223	829 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	SERPINB1	P30740	379 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	CSF2RB	P32927	897 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	GRK3	P35626	688 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	PIK3CB	P42338	1070 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	SCTR	P47872	440 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	NEK2	P51955	445 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	ARFIP2	P53365	341 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	GFER	P55789	205 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	CFHR1	Q03591	330 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	RELA	Q04206	551 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	SLC9B1	Q4ZJI4	515 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	FCRL6	Q6DN72	434 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	SCIMP	Q6UWF3	145 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	FAM92B	Q6ZTR7	304 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	TRIM46	Q7Z4K8	759 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	PLXDC1	Q8IUK5	500 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	COL27A1	Q8IZC6	1860 aa	Predicted RBP	11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	CARF	Q8N187	725 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	TBC1D19	Q8N5T2	526 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	BAHD1	Q8TBE0	780 aa	Predicted RBP	11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	SELENOM	Q8WWX9	145 aa		11.73	□□□□□ -0.53
ERBB3-208	ENST00000549205	CCT6B	Q92526	530 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms