RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 TGIF2Q9GZN2 237 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 PPANQ9NQ55 473 aaKnown RBP8.9□□□□□ -0.98
YBX3-218ENST00000546298 RIC8BQ9NVN3 520 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 ASF1BQ9NVP2 202 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 CORO1CQ9ULV4 474 aaPredicted RBP8.9□□□□□ -0.98
YBX3-218ENST00000546298 PDE10AQ9Y233 779 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 PCDHGA10Q9Y5H3 936 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 SMG1Q96Q15 3661 aaKnown RBP8.9□□□□□ -0.98
YBX3-218ENST00000546298 PIKFYVEQ9Y2I7 2098 aa8.9□□□□□ -0.99
YBX3-218ENST00000546298 A0A1W2PQ72 361 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 DYTNA2CJ06 578 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 CCDC188H7C350 402 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 FOXS1O43638 330 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 ALOX12BO75342 701 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 WFS1O76024 890 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 BMP10O95393 424 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 CBX6O95503 412 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 AHSGP02765 367 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 UQCRHP07919 91 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 MYBL2P10244 700 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 GABRB3P28472 473 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 ELK3P41970 407 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 AP1S2P56377 157 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 GNG11P61952 73 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 TBPL1P62380 186 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 DR1Q01658 176 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 ILF2Q12905 390 aaKnown RBP8.89□□□□□ -0.99
YBX3-218ENST00000546298 CDC16Q13042 620 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 MFAP5Q13361 173 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 NAE1Q13564 534 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 ZNF169Q14929 603 aaPredicted RBP8.89□□□□□ -0.99
YBX3-218ENST00000546298 HIF1AQ16665 826 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 EIF2S3LQ2VIR3 472 aaKnown RBP8.89□□□□□ -0.99
YBX3-218ENST00000546298 CRB2Q5IJ48 1285 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 DUPD1Q68J44 220 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 FAM45BPQ6NSW5 357 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 PAQR3Q6TCH7 311 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 LCTLQ6UWM7 567 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 RIPOR1Q6ZS17 1223 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 CUZD1Q86UP6 607 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 PLD3Q8IV08 490 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 KLHL7Q8IXQ5 586 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 GPATCH11Q8N954 259 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 FAM45AQ8TCE6 357 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 ALKBH8Q96BT7 664 aaKnown RBP8.89□□□□□ -0.99
YBX3-218ENST00000546298 C19orf60Q96EN9 201 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 LINGO1Q96FE5 620 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 CNDP1Q96KN2 507 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 ATG10Q9H0Y0 220 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 ZBTB20Q9HC78 741 aaPredicted RBP8.89□□□□□ -0.99
YBX3-218ENST00000546298 ZNF160Q9HCG1 818 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 ANKHQ9HCJ1 492 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 RNF14Q9UBS8 474 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 MKL2Q9ULH7 1088 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 NOVA2Q9UNW9 492 aaKnown RBP8.89□□□□□ -0.99
YBX3-218ENST00000546298 VWA7Q9Y334 891 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 SAR1BQ9Y6B6 198 aa8.89□□□□□ -0.99
YBX3-218ENST00000546298 LOC102723996A0A087X1L8 192 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 ANKUB1A6NFN9 424 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 P2RX6O15547 441 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 NSA2O95478 260 aaKnown RBP8.88□□□□□ -0.99
YBX3-218ENST00000546298 ENO2P09104 434 aaPredicted RBP8.88□□□□□ -0.99
YBX3-218ENST00000546298 PRR35P0CG20 571 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 C8orf89P0DMQ9 161 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 COX6A1P12074 109 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 IL10P22301 178 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 IVDP26440 423 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 CCR8P51685 355 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 CDKN2DP55273 166 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 SKP1P63208 163 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 CSNK1G2P78368 415 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 ARG2P78540 354 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 MGAT5Q09328 741 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 Q0VFX4 171 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 MRPL49Q13405 166 aaKnown RBP8.88□□□□□ -0.99
YBX3-218ENST00000546298 FRG1Q14331 258 aaKnown RBP8.88□□□□□ -0.99
YBX3-218ENST00000546298 NR6A1Q15406 480 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 MSS51Q4VC12 460 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 RBM20Q5T481 1227 aaKnown RBP8.88□□□□□ -0.99
YBX3-218ENST00000546298 TEDDM1Q5T9Z0 273 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 HECTD2Q5U5R9 776 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 NIPAL1Q6NVV3 410 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 HIBCHQ6NVY1 386 aaPredicted RBP8.88□□□□□ -0.99
YBX3-218ENST00000546298 LINC00696Q6ZRV3 163 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 ASPGQ86U10 573 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 LAPTM4BQ86VI4 370 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 CREG2Q8IUH2 290 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 ZC3H7AQ8IWR0 971 aaKnown RBP8.88□□□□□ -0.99
YBX3-218ENST00000546298 ARHGEF39Q8N4T4 335 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 AMER3Q8N944 861 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 BBOF1Q8ND07 529 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 SLC13A3Q8WWT9 602 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 C8orf44Q96CB5 159 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 CFAP36Q96G28 342 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 CAPZA3Q96KX2 299 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 BARD1Q99728 777 aaKnown RBP8.88□□□□□ -0.99
YBX3-218ENST00000546298 NAPGQ99747 312 aaPredicted RBP8.88□□□□□ -0.99
YBX3-218ENST00000546298 TUBB6Q9BUF5 446 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 SGPP1Q9BX95 441 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 ARL15Q9NXU5 204 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms