RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 IGKV1-8A0A0C4DH67 115 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 TXNDC9O14530 226 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 SH3BP5O60239 455 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 FAM107AO95990 144 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 RPLP0P05388 317 aaKnown RBP15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 MPSTP25325 297 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 PSMB5P28074 263 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 ZRSR2Q15696 482 aaKnown RBP15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 SMU1Q2TAY7 513 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 PERM1Q5SV97 790 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 KIAA1614Q5VZ46 1190 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 TTC19Q6DKK2 380 aaPredicted RBP15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 FIGLAQ6QHK4 219 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 TRIM46Q7Z4K8 759 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 CPLX4Q7Z7G2 160 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 MYLK4Q86YV6 388 aaPredicted RBP15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 PARP9Q8IXQ6 854 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 C2orf73Q8N5S3 287 aaPredicted RBP15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 ZNF655Q8N720 491 aaPredicted RBP15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 CDYL2Q8N8U2 506 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 C19orf47Q8N9M1 422 aaKnown RBP15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 TRPV3Q8NET8 790 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 OR7G3Q8NG95 312 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 WDR20Q8TBZ3 569 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 CCT6BQ92526 530 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 NCSTNQ92542 709 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 TRAPPC9Q96Q05 1148 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 GFM1Q96RP9 751 aaKnown RBP15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 ZMYND15Q9H091 742 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 FGFR1OP2Q9NVK5 253 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 RIC8BQ9NVN3 520 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 CUEDC1Q9NWM3 386 aaPredicted RBP15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 APOBEC2Q9Y235 224 aaKnown RBP15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 RNF11Q9Y3C5 154 aa15.37■□□□□ 0.05
PRPF40A-212ENST00000545856 H7BY64 318 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 SLC28A1O00337 649 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 SRPX2O60687 465 aaPredicted RBP15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 CLEC3AO75596 197 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 RFPL3O75679 317 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 CD22P20273 847 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 MAGP20916 626 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 SDHBP21912 280 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 PRPH2P23942 346 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 SCTRP47872 440 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 CPSF6Q16630 551 aaKnown RBP eCLIP15.36■□□□□ 0.052e-11■■■□□ 17.5
PRPF40A-212ENST00000545856 UGT3A2Q3SY77 523 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 CATSPEREQ5SY80 951 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 TMTC4Q5T4D3 741 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 RPS27LQ71UM5 84 aaKnown RBP15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 ADCK2Q7Z695 626 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 MFSD9Q8NBP5 474 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 TWIST2Q8WVJ9 160 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 JPH3Q8WXH2 748 aaPredicted RBP15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 KLHL6Q8WZ60 621 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 SLC41A2Q96JW4 573 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 PRAP1Q96NZ9 151 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 ZFYVE21Q9BQ24 234 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 CENPKQ9BS16 269 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 ZNF768Q9H5H4 540 aaKnown RBP15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 MEAF6Q9HAF1 191 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 PDE7BQ9NP56 450 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 RXFP3Q9NSD7 469 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 ABCF3Q9NUQ8 709 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 ZFP69BQ9UJL9 534 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 DNAJC15Q9Y5T4 150 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 USH1CQ9Y6N9 552 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 PTPRZ1P23471 2315 aaPredicted RBP15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 ANKDD1BA6NHY2 528 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 D6RAR5 112 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 MANBAO00462 879 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 PPP6CO00743 305 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 RGS14O43566 566 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 PRAMEF4O60810 478 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 SEMA3DO95025 777 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 THRAP10827 490 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 ACPPP15309 386 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 TSPAN8P19075 237 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 CSF2RBP32927 897 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 PPM1FP49593 454 aaPredicted RBP15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 HSD11B2P80365 405 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 PWP1Q13610 501 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 SPIDRQ14159 915 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 XKR7Q5GH72 579 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 PRAMEF9Q5VWM5 478 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 NIPAL1Q6NVV3 410 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 ASCL5Q7RTU5 278 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 CACTIN-AS1Q8N1I8 211 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 SELENOMQ8WWX9 145 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 C19orf60Q96EN9 201 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 MAELQ96JY0 434 aaKnown RBP15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 TMEM74Q96NL1 305 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 TGM7Q96PF1 710 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 CDK15Q96Q40 435 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 SERPINI1Q99574 410 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 NLNQ9BYT8 704 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 SH2B3Q9UQQ2 575 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 PCDHGA4Q9Y5G9 962 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 AP1M2Q9Y6Q5 423 aa15.36■□□□□ 0.05
PRPF40A-212ENST00000545856 ADAMTS20P59510 1910 aa15.35■□□□□ 0.05
PRPF40A-212ENST00000545856 CNOT1A5YKK6 2376 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms