RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SYN2Q92777 582 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-224ENST00000545688 SFXN2Q96NB2 322 aa3.79□□□□□ -1.8
SNHG1-224ENST00000545688 SPAG5Q96R06 1193 aa3.79□□□□□ -1.8
SNHG1-224ENST00000545688 SLC35C2Q9NQQ7 365 aa3.79□□□□□ -1.8
SNHG1-224ENST00000545688 PADI2Q9Y2J8 665 aa3.79□□□□□ -1.8
SNHG1-224ENST00000545688 NPHP3Q7Z494 1330 aa3.78□□□□□ -1.8
SNHG1-224ENST00000545688 A0A1W2PNU3 283 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-224ENST00000545688 A8MU10 97 aa3.78□□□□□ -1.8
SNHG1-224ENST00000545688 SNURFLB1AK76 121 aa3.78□□□□□ -1.8
SNHG1-224ENST00000545688 BCL2L11O43521 198 aa3.78□□□□□ -1.8
SNHG1-224ENST00000545688 HPRP00739 348 aa3.78□□□□□ -1.8
SNHG1-224ENST00000545688 DANCRP0C864 163 aa3.78□□□□□ -1.8
SNHG1-224ENST00000545688 ITIH1P19827 911 aa3.78□□□□□ -1.8
SNHG1-224ENST00000545688 MPZP25189 248 aa3.78□□□□□ -1.8
SNHG1-224ENST00000545688 C15orf59Q2T9L4 293 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-224ENST00000545688 SLC47A2Q86VL8 602 aa3.78□□□□□ -1.8
SNHG1-224ENST00000545688 LINC00346Q8IVM7 164 aa3.78□□□□□ -1.8
SNHG1-224ENST00000545688 LRRC15Q8TF66 581 aa3.78□□□□□ -1.8
SNHG1-224ENST00000545688 SLAMF9Q96A28 289 aa3.78□□□□□ -1.8
SNHG1-224ENST00000545688 THOC1Q96FV9 657 aaKnown RBP3.78□□□□□ -1.8
SNHG1-224ENST00000545688 SLC45A3Q96JT2 553 aa3.78□□□□□ -1.8
SNHG1-224ENST00000545688 TIGD1Q96MW7 591 aa3.78□□□□□ -1.8
SNHG1-224ENST00000545688 RPP25Q9BUL9 199 aaKnown RBP3.78□□□□□ -1.8
SNHG1-224ENST00000545688 PUS3Q9BZE2 481 aaKnown RBP3.78□□□□□ -1.8
SNHG1-224ENST00000545688 FBXO2Q9UK22 296 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-224ENST00000545688 BRWD3Q6RI45 1802 aa3.78□□□□□ -1.8
SNHG1-224ENST00000545688 ADGRL2O95490 1459 aa3.78□□□□□ -1.8
SNHG1-224ENST00000545688 GON4LQ3T8J9 2241 aa3.78□□□□□ -1.8
SNHG1-224ENST00000545688 PARD3Q8TEW0 1356 aa3.77□□□□□ -1.81
SNHG1-224ENST00000545688 PTPN23Q9H3S7 1636 aa3.77□□□□□ -1.81
SNHG1-224ENST00000545688 IGLV3-10A0A075B6K4 115 aa3.77□□□□□ -1.81
SNHG1-224ENST00000545688 LOC100509620A0A075B734 347 aa3.77□□□□□ -1.81
SNHG1-224ENST00000545688 MATR3P43243 847 aaKnown RBP eCLIP3.77□□□□□ -1.81
SNHG1-224ENST00000545688 STAT2P52630 851 aa3.77□□□□□ -1.81
SNHG1-224ENST00000545688 HNRNPKP61978 463 aaKnown RBP eCLIP3.77□□□□□ -1.81
SNHG1-224ENST00000545688 EXT1Q16394 746 aa3.77□□□□□ -1.81
SNHG1-224ENST00000545688 LEKR1Q6ZMV7 388 aa3.77□□□□□ -1.81
SNHG1-224ENST00000545688 SLC37A3Q8NCC5 494 aa3.77□□□□□ -1.81
SNHG1-224ENST00000545688 SPACA9Q96E40 222 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-224ENST00000545688 C4orf45Q96LM5 186 aa3.77□□□□□ -1.81
SNHG1-224ENST00000545688 CCDC3Q9BQI4 270 aa3.77□□□□□ -1.81
SNHG1-224ENST00000545688 GHITMQ9H3K2 345 aa3.77□□□□□ -1.81
SNHG1-224ENST00000545688 TLE6Q9H808 572 aa3.77□□□□□ -1.81
SNHG1-224ENST00000545688 GNB4Q9HAV0 340 aa3.77□□□□□ -1.81
SNHG1-224ENST00000545688 HAUS2Q9NVX0 235 aa3.77□□□□□ -1.81
SNHG1-224ENST00000545688 GPR83Q9NYM4 423 aa3.77□□□□□ -1.81
SNHG1-224ENST00000545688 ABT1Q9ULW3 272 aaKnown RBP3.77□□□□□ -1.81
SNHG1-224ENST00000545688 DAPK1P53355 1430 aa3.77□□□□□ -1.81
SNHG1-224ENST00000545688 ANKRD30AQ9BXX3 1397 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 ITIH6Q6UXX5 1313 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 NALCNQ8IZF0 1738 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 ACOD1A6NK06 481 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 ARPC2O15144 300 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 IGHV2-70P01814 119 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 KRTAP1-4P0C5Y4 121 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 THEGLP0DJG4 465 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 RPL35AP18077 110 aaKnown RBP3.76□□□□□ -1.81
SNHG1-224ENST00000545688 HOXD13P35453 343 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 RXRGP48443 463 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 CDH18Q13634 790 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 NOTUMQ6P988 496 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 GDPGP1Q6ZNW5 385 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 NUP54Q7Z3B4 507 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 LGI2Q8N0V4 545 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 METTL4Q8N3J2 472 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 TEX19Q8NA77 164 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 OR10S1Q8NGN2 331 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 CHPT1Q8WUD6 406 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 ZNF622Q969S3 477 aaKnown RBP eCLIP3.76□□□□□ -1.81
SNHG1-224ENST00000545688 ATXN7L3BQ96GX2 97 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 ZNF414Q96IQ9 312 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 LPAR4Q99677 370 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 TDRD1Q9BXT4 1180 aaKnown RBP3.76□□□□□ -1.81
SNHG1-224ENST00000545688 CHST11Q9NPF2 352 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 B3GAT2Q9NPZ5 323 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.76□□□□□ -1.81
SNHG1-224ENST00000545688 ZNF510Q9Y2H8 683 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 WIPI2Q9Y4P8 454 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 R4GN57 208 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 MYO5BQ9ULV0 1848 aa3.76□□□□□ -1.81
SNHG1-224ENST00000545688 MARF1Q9Y4F3 1742 aaKnown RBP3.75□□□□□ -1.81
SNHG1-224ENST00000545688 GCC2Q8IWJ2 1684 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 LOC105371242A0A075B767 164 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 A0A087WUV0 522 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-224ENST00000545688 NEMP2A6NFY4 417 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 H0YAE9 185 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 TEX28O15482 410 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 ENTPD3O75355 529 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 CSH1P0DML2 217 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 CSH2P0DML3 217 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 MAPK12P53778 367 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 ZFP36L1Q07352 338 aaKnown RBP3.75□□□□□ -1.81
SNHG1-224ENST00000545688 PHKG1Q16816 387 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 ZNF584Q8IVC4 421 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 C11orf53Q8IXP5 236 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 RPAP2Q8IXW5 612 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-224ENST00000545688 ABHD12Q8N2K0 398 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 MINDY1Q8N5J2 469 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 ZPLD1Q8TCW7 415 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 SLC22A18Q96BI1 424 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms