RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 NDC80O14777 642 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 NRDCO43847 1150 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 PEX1O43933 1283 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 S1PR4O95977 384 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 ERVK-10P10266 1014 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 GZMAP12544 262 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 ITGA8P53708 1063 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 CSE1LP55060 971 aaKnown RBP14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 TAS2R40P59535 323 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 GPR85P60893 370 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 ARF3P61204 181 aaPredicted RBP14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 PDK2Q15119 407 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 MINDY4Q4G0A6 757 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 MFSD4BQ5TF39 518 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 ANKRD37Q7Z713 158 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 YTHDF3Q7Z739 585 aaKnown RBP14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 SERPINA9Q86WD7 417 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 PAQR7Q86WK9 346 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 ULK2Q8IYT8 1036 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 LGI4Q8N135 537 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 KIF2BQ8N4N8 673 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 SLC5A8Q8N695 610 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 ELMO1Q92556 727 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 RAPGEF5Q92565 580 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 PANX2Q96RD6 677 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 FICDQ9BVA6 458 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 HAUS4Q9H6D7 363 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 MMP25Q9NPA2 562 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 IP6K2Q9UHH9 426 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 TGP01266 2768 aa14.44□□□□□ -0.1
CLSTN3-216ENST00000545663 SLC5A10A0PJK1 596 aa14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 SOWAHDA6NJG2 315 aa14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 C2orf81A6NN90 581 aa14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 LIN7AO14910 233 aaPredicted RBP14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 SLC16A5O15375 505 aa14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 ANXA5P08758 320 aa14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 CYB561P49447 251 aa14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 KRTAP1-1Q07627 177 aa14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 TAF1AQ15573 450 aaPredicted RBP14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 HADHQ16836 314 aaKnown RBP14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 KAZNQ674X7 775 aa14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 LRRC8BQ6P9F7 803 aa14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 PODNL1Q6PEZ8 512 aa14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 RNF44Q7L0R7 432 aa14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 SNX20Q7Z614 316 aa14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 RPS19BP1Q86WX3 136 aaKnown RBP14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 OR2L8Q8NGY9 312 aa14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 LINC01560Q8TB33 94 aa14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 HEXDCQ8WVB3 486 aa14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 OLFM3Q96PB7 478 aa14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 SH3GL2Q99962 352 aa14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 ABHD10Q9NUJ1 306 aa14.43□□□□□ -0.1
CLSTN3-216ENST00000545663 A0A0U1RQJ8 604 aa14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 KRT87PA6NCN2 255 aa14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 CLCA1A8K7I4 914 aa14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 PRPF4O43172 522 aaKnown RBP eCLIP14.42□□□□□ -0.16e-6■■■■□ 19.9
CLSTN3-216ENST00000545663 PHF1O43189 567 aaPredicted RBP14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 SMPD2O60906 423 aa14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 MYBL1P10243 752 aa14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 EPXP11678 715 aa14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 ITGALP20701 1170 aa14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 ACRV1P26436 265 aa14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 TNNT3P45378 269 aaPredicted RBP14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 WASHC5Q12768 1159 aa14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 PDK1Q15118 436 aa14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 EXT1Q16394 746 aa14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 CAPN12Q6ZSI9 719 aa14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 MAP7D3Q8IWC1 876 aa14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 ZFP62Q8NB50 900 aaPredicted RBP14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 RELL2Q8NC24 303 aaPredicted RBP14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 CFAP61Q8NHU2 1237 aa14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 TRIM11Q96F44 468 aa14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 SARGQ9BW04 601 aa14.42□□□□□ -0.1
CLSTN3-216ENST00000545663 KLRC4-KLRK1H3BQV0 150 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 NID1P14543 1247 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 KDELR1P24390 212 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 MC4RP32245 332 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 ARHGAP25P42331 645 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 E4F1Q66K89 784 aaPredicted RBP14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 PAPD4Q6PIY7 484 aaKnown RBP14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 TAS2R42Q7RTR8 314 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 MDGA2Q7Z553 956 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 VRK3Q8IV63 474 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 PIANPQ8IYJ0 282 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 ARHGEF39Q8N4T4 335 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 CSNK1A1LQ8N752 337 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 MVB12AQ96EY5 273 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 CCDC42Q96M95 316 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 APOL2Q9BQE5 337 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 CNPPD1Q9BV87 410 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 ISCUQ9H1K1 167 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 TRIM45Q9H8W5 580 aaPredicted RBP14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 SMARCAL1Q9NZC9 954 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 VPS9D1Q9Y2B5 631 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 KLF13Q9Y2Y9 288 aaPredicted RBP14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 LIPGQ9Y5X9 500 aa14.41□□□□□ -0.1
CLSTN3-216ENST00000545663 PINLYPA6NC86 204 aa14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 TUBAL3A6NHL2 446 aa14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 FAM166BA8MTA8 275 aa14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 KDM1AO60341 852 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms