RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 A0A0A6YYC8 382 aaPredicted RBP20.06■□□□□ 0.8
SCARB1-210ENST00000545493 A0A1W2PQ72 361 aa20.06■□□□□ 0.8
SCARB1-210ENST00000545493 IDSB3KWA1 339 aa20.06■□□□□ 0.8
SCARB1-210ENST00000545493 I3L1I5 382 aaPredicted RBP20.06■□□□□ 0.8
SCARB1-210ENST00000545493 PRPF4O43172 522 aaKnown RBP eCLIP20.06■□□□□ 0.87e-7■■□□□ 11.9
SCARB1-210ENST00000545493 AGFG2O95081 481 aa20.06■□□□□ 0.8
SCARB1-210ENST00000545493 AHSGP02765 367 aa20.06■□□□□ 0.8
SCARB1-210ENST00000545493 C8GP07360 202 aa20.06■□□□□ 0.8
SCARB1-210ENST00000545493 GP1BBP13224 206 aa20.06■□□□□ 0.8
SCARB1-210ENST00000545493 VARSP26640 1264 aaKnown RBP20.06■□□□□ 0.8
SCARB1-210ENST00000545493 PGGT1BP53609 377 aa20.06■□□□□ 0.8
SCARB1-210ENST00000545493 EEF1A2Q05639 463 aaKnown RBP20.06■□□□□ 0.8
SCARB1-210ENST00000545493 NR6A1Q15406 480 aa20.06■□□□□ 0.8
SCARB1-210ENST00000545493 PHKG1Q16816 387 aa20.06■□□□□ 0.8
SCARB1-210ENST00000545493 AGAP7PQ5VUJ5 663 aa20.06■□□□□ 0.8
SCARB1-210ENST00000545493 UGT3A1Q6NUS8 523 aa20.06■□□□□ 0.8
SCARB1-210ENST00000545493 KIAA0408Q6ZU52 694 aa20.06■□□□□ 0.8
SCARB1-210ENST00000545493 GALNT7Q86SF2 657 aa20.06■□□□□ 0.8
SCARB1-210ENST00000545493 LINGO1Q96FE5 620 aa20.06■□□□□ 0.8
SCARB1-210ENST00000545493 THOC3Q96J01 351 aaKnown RBP20.06■□□□□ 0.8
SCARB1-210ENST00000545493 AGAP4Q96P64 663 aa20.06■□□□□ 0.8
SCARB1-210ENST00000545493 NAT9Q9BTE0 207 aa20.06■□□□□ 0.8
SCARB1-210ENST00000545493 TAS2R13Q9NYV9 303 aa20.06■□□□□ 0.8
SCARB1-210ENST00000545493 CPAMD8Q8IZJ3 1885 aa20.05■□□□□ 0.8
SCARB1-210ENST00000545493 RGS4P49798 205 aa20.05■□□□□ 0.8
SCARB1-210ENST00000545493 MAT1AQ00266 395 aaKnown RBP20.05■□□□□ 0.8
SCARB1-210ENST00000545493 MORF4L2Q15014 288 aa20.05■□□□□ 0.8
SCARB1-210ENST00000545493 TRMT10BQ6PF06 316 aaKnown RBP20.05■□□□□ 0.8
SCARB1-210ENST00000545493 CREG2Q8IUH2 290 aa20.05■□□□□ 0.8
SCARB1-210ENST00000545493 KLHL7Q8IXQ5 586 aa20.05■□□□□ 0.8
SCARB1-210ENST00000545493 SHISA5Q8N114 240 aa20.05■□□□□ 0.8
SCARB1-210ENST00000545493 MYO1HQ8N1T3 1032 aa20.05■□□□□ 0.8
SCARB1-210ENST00000545493 CFAP36Q96G28 342 aa20.05■□□□□ 0.8
SCARB1-210ENST00000545493 VPS50Q96JG6 964 aa20.05■□□□□ 0.8
SCARB1-210ENST00000545493 CCDC138Q96M89 665 aa20.05■□□□□ 0.8
SCARB1-210ENST00000545493 BARD1Q99728 777 aaKnown RBP20.05■□□□□ 0.8
SCARB1-210ENST00000545493 TRIM51Q9BSJ1 452 aa20.05■□□□□ 0.8
SCARB1-210ENST00000545493 TGIF2Q9GZN2 237 aa20.05■□□□□ 0.8
SCARB1-210ENST00000545493 MKKSQ9NPJ1 570 aaPredicted RBP20.05■□□□□ 0.8
SCARB1-210ENST00000545493 SPTBN1Q01082 2364 aaKnown RBP20.04■□□□□ 0.8
SCARB1-210ENST00000545493 ANXA5P08758 320 aa20.04■□□□□ 0.8
SCARB1-210ENST00000545493 FDXRP22570 491 aa20.04■□□□□ 0.8
SCARB1-210ENST00000545493 ELK3P41970 407 aa20.04■□□□□ 0.8
SCARB1-210ENST00000545493 CSNK1G2P78368 415 aa20.04■□□□□ 0.8
SCARB1-210ENST00000545493 ZXDCQ2QGD7 858 aaPredicted RBP20.04■□□□□ 0.8
SCARB1-210ENST00000545493 EIF2S3LQ2VIR3 472 aaKnown RBP20.04■□□□□ 0.8
SCARB1-210ENST00000545493 HP1BP3Q5SSJ5 553 aaPredicted RBP20.04■□□□□ 0.8
SCARB1-210ENST00000545493 TEDDM1Q5T9Z0 273 aa20.04■□□□□ 0.8
SCARB1-210ENST00000545493 IRAK1BP1Q5VVH5 260 aa20.04■□□□□ 0.8
SCARB1-210ENST00000545493 STEAP4Q687X5 459 aa20.04■□□□□ 0.8
SCARB1-210ENST00000545493 HIBCHQ6NVY1 386 aaPredicted RBP20.04■□□□□ 0.8
SCARB1-210ENST00000545493 AGTRAPQ6RW13 159 aa20.04■□□□□ 0.8
SCARB1-210ENST00000545493 PRSS41Q7RTY9 318 aa20.04■□□□□ 0.8
SCARB1-210ENST00000545493 OLFM1Q99784 485 aa20.04■□□□□ 0.8
SCARB1-210ENST00000545493 YIPF2Q9BWQ6 316 aa20.04■□□□□ 0.8
SCARB1-210ENST00000545493 SGPP1Q9BX95 441 aa20.04■□□□□ 0.8
SCARB1-210ENST00000545493 ATG10Q9H0Y0 220 aa20.04■□□□□ 0.8
SCARB1-210ENST00000545493 PARVBQ9HBI1 364 aa20.04■□□□□ 0.8
SCARB1-210ENST00000545493 TMEM184CQ9NVA4 438 aa20.04■□□□□ 0.8
SCARB1-210ENST00000545493 ICE1Q9Y2F5 2266 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 IGHV1-45A0A0A0MS14 117 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 NSG1A0A0A6YYJ2 146 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 TXNDC9O14530 226 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 FANCGO15287 622 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 TP73O15350 636 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 SLC16A5O15375 505 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 KLHL18O94889 574 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 CELA2AP08217 269 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 SOX11P35716 441 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 BCL6P41182 706 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 EMP2P54851 167 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 RPS15AP62244 130 aaKnown RBP20.03■□□□□ 0.8
SCARB1-210ENST00000545493 DR1Q01658 176 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 FAM53BQ14153 422 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 HECTD2Q5U5R9 776 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 LINC00696Q6ZRV3 163 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 NDUFAF7Q7L592 441 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 AMER2Q8N7J2 671 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 GPATCH11Q8N954 259 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 OR9A4Q8NGU2 314 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 GABPB2Q8TAK5 448 aaPredicted RBP20.03■□□□□ 0.8
SCARB1-210ENST00000545493 MCOLN3Q8TDD5 553 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 SSC4DQ8WTU2 575 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 MACROD1Q9BQ69 325 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 EPS8L2Q9H6S3 715 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 TEX264Q9Y6I9 313 aa20.03■□□□□ 0.8
SCARB1-210ENST00000545493 KCNE1BA0A087WTH5 132 aa20.02■□□□□ 0.8
SCARB1-210ENST00000545493 FEZF1A0PJY2 475 aa20.02■□□□□ 0.8
SCARB1-210ENST00000545493 E2F3O00716 465 aa20.02■□□□□ 0.8
SCARB1-210ENST00000545493 SEC31AO94979 1220 aaKnown RBP20.02■□□□□ 0.8
SCARB1-210ENST00000545493 CBX6O95503 412 aa20.02■□□□□ 0.8
SCARB1-210ENST00000545493 HEXBP07686 556 aa20.02■□□□□ 0.8
SCARB1-210ENST00000545493 CDH1P12830 882 aa20.02■□□□□ 0.8
SCARB1-210ENST00000545493 HRH2P25021 359 aa20.02■□□□□ 0.8
SCARB1-210ENST00000545493 TSFMP43897 325 aaKnown RBP20.02■□□□□ 0.8
SCARB1-210ENST00000545493 GLRBP48167 497 aa20.02■□□□□ 0.8
SCARB1-210ENST00000545493 MFAP5Q13361 173 aa20.02■□□□□ 0.8
SCARB1-210ENST00000545493 NAE1Q13564 534 aa20.02■□□□□ 0.8
SCARB1-210ENST00000545493 PCOLCEQ15113 449 aa20.02■□□□□ 0.8
SCARB1-210ENST00000545493 FAAH2Q6GMR7 532 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms