RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 VMP1Q96GC9 406 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 PPP1R16AQ96I34 528 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 CCM2Q9BSQ5 444 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 GABARAPL3Q9BY60 117 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 REEP1Q9H902 201 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 TPT1P8Q9HAU6 139 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 TDP1Q9NUW8 608 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 ATP6V1HQ9UI12 483 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 FBXO10Q9UK96 956 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 PCDHGB3Q9Y5G1 929 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 ZNF99A8MXY4 864 aaPredicted RBP12.04□□□□□ -0.48
PAAF1-215ENST00000544909 C9P02748 559 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 CLTBP09497 229 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 TYRP14679 529 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 IL7RP16871 459 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 CD22P20273 847 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 TIA1P31483 386 aaKnown RBP eCLIP12.04□□□□□ -0.48
PAAF1-215ENST00000544909 STT3AP46977 705 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 C21orf59P57076 290 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 FCHO2Q0JRZ9 810 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 LAPTM5Q13571 262 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 C16orf72Q14CZ0 275 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 ZNF77Q15935 545 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 MEP1AQ16819 746 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 SYT6Q5T7P8 510 aaPredicted RBP12.04□□□□□ -0.48
PAAF1-215ENST00000544909 CPTPQ5TA50 214 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 LAIR2Q6ISS4 152 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 IKBIPQ70UQ0 350 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 TMEM25Q86YD3 366 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 NPAS3Q8IXF0 933 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 LAS2Q8IYD9 372 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 NATD1Q8N6N6 113 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 C11orf65Q8NCR3 313 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 NUDT8Q8WV74 236 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 S100ZQ8WXG8 99 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 AUTS2Q8WXX7 1259 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 UBE2E3Q969T4 207 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 PYCR2Q96C36 320 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 MTFMTQ96DP5 389 aaKnown RBP12.04□□□□□ -0.48
PAAF1-215ENST00000544909 LINC00615Q96LM1 132 aaPredicted RBP12.04□□□□□ -0.48
PAAF1-215ENST00000544909 ZNF347Q96SE7 839 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 YME1L1Q96TA2 773 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 CRISPLD2Q9H0B8 497 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 GPBP1L1Q9HC44 474 aaPredicted RBP12.04□□□□□ -0.48
PAAF1-215ENST00000544909 PCDH12Q9NPG4 1184 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 TMEM39AQ9NV64 488 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 VPS4AQ9UN37 437 aa12.04□□□□□ -0.48
PAAF1-215ENST00000544909 C17orf113A0A1B0GUU1 675 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 A8MX80 341 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 NEDD8-MDP1E9PL57 170 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 NDUFS2O75306 463 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 ZNF682O95780 498 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 MYCLP1P12525 358 aaPredicted RBP12.03□□□□□ -0.48
PAAF1-215ENST00000544909 DDX5P17844 614 aaKnown RBP12.03□□□□□ -0.48
PAAF1-215ENST00000544909 EFNA1P20827 205 aaPredicted RBP12.03□□□□□ -0.48
PAAF1-215ENST00000544909 ITPKAP23677 461 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 GRK3P35626 688 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 PIK3CBP42338 1070 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 ZNF763Q0D2J5 394 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 HKDC1Q2TB90 917 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 ZNF658BQ4V348 819 aaPredicted RBP12.03□□□□□ -0.48
PAAF1-215ENST00000544909 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.03□□□□□ -0.48
PAAF1-215ENST00000544909 MED27Q6P2C8 311 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 SERPINA13PQ6UXR4 307 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 UNC5DQ6UXZ4 953 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 PRSS48Q7RTY5 328 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 ZNF551Q7Z340 670 aaPredicted RBP12.03□□□□□ -0.48
PAAF1-215ENST00000544909 HSD11B1LQ7Z5J1 315 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 TMEM179BQ7Z7N9 219 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 ANKRD46Q86W74 232 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 C10orf111Q8N326 155 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 CHST14Q8NCH0 376 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 OR7G3Q8NG95 312 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 RORBQ92753 470 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 EGLN2Q96KS0 407 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 PSD2Q9BQI7 771 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 CORO1BQ9BR76 489 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 FUNDC2Q9BWH2 189 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 TMEM38AQ9H6F2 299 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 GIN1Q9NXP7 522 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 IL36AQ9UHA7 158 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 SLCO3A1Q9UIG8 710 aa12.03□□□□□ -0.48
PAAF1-215ENST00000544909 SAMHD1Q9Y3Z3 626 aaKnown RBP12.03□□□□□ -0.48
PAAF1-215ENST00000544909 MGAT4DA6NG13 374 aa12.02□□□□□ -0.48
PAAF1-215ENST00000544909 SUV39H1O43463 412 aa12.02□□□□□ -0.48
PAAF1-215ENST00000544909 B4GAT1O43505 415 aa12.02□□□□□ -0.48
PAAF1-215ENST00000544909 LEFTY1O75610 366 aa12.02□□□□□ -0.48
PAAF1-215ENST00000544909 IFNA14P01570 189 aa12.02□□□□□ -0.48
PAAF1-215ENST00000544909 TIMP2P16035 220 aa12.02□□□□□ -0.48
PAAF1-215ENST00000544909 ITGA2P17301 1181 aa12.02□□□□□ -0.48
PAAF1-215ENST00000544909 PTPN2P17706 415 aa12.02□□□□□ -0.48
PAAF1-215ENST00000544909 XPAP23025 273 aaPredicted RBP12.02□□□□□ -0.48
PAAF1-215ENST00000544909 IMPA1P29218 277 aa12.02□□□□□ -0.48
PAAF1-215ENST00000544909 SERPINB10P48595 397 aa12.02□□□□□ -0.48
PAAF1-215ENST00000544909 GALK1P51570 392 aa12.02□□□□□ -0.48
PAAF1-215ENST00000544909 PHEXP78562 749 aa12.02□□□□□ -0.48
PAAF1-215ENST00000544909 DEFB103AP81534 67 aa12.02□□□□□ -0.48
PAAF1-215ENST00000544909 RAPSNQ13702 412 aa12.02□□□□□ -0.48
PAAF1-215ENST00000544909 PDE7AQ13946 482 aa12.02□□□□□ -0.48
PAAF1-215ENST00000544909 IQCCQ4KMZ1 466 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms