RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 CFAP206Q8IYR0 622 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 WDR36Q8NI36 951 aaKnown RBP11.1□□□□□ -0.63
COPS7A-217ENST00000543537 CCDC74AQ96AQ1 378 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 TUBGCP3Q96CW5 907 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 OR52B2Q96RD2 323 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 UNKQ9C0B0 810 aaKnown RBP11.1□□□□□ -0.63
COPS7A-217ENST00000543537 OR2AG1Q9H205 316 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 ACTR8Q9H981 624 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 THSD1Q9NS62 852 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 ARL8BQ9NVJ2 186 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 GID8Q9NWU2 228 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 ASIC5Q9NY37 505 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 ZIM2Q9NZV7 527 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 SPATA7Q9P0W8 599 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 ATXN10Q9UBB4 475 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 EIF3LQ9Y262 564 aaKnown RBP11.1□□□□□ -0.63
COPS7A-217ENST00000543537 PCDHGA11Q9Y5H2 935 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 UNC13CQ8NB66 2214 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 CCDC187A0A096LP49 1063 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 A0A1W2PQM1 296 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 OR2AG2A6NM03 316 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 UBFD1O14562 309 aaKnown RBP11.09□□□□□ -0.63
COPS7A-217ENST00000543537 INPP4BO15327 924 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 GPR39O43194 453 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 GUCA1CO95843 209 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 SNRPB2P08579 225 aaKnown RBP11.09□□□□□ -0.63
COPS7A-217ENST00000543537 PRPH2P23942 346 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 PIK3R1P27986 724 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 ITPKBP27987 946 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 HSPA7P48741 367 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 PGGT1BP53609 377 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 ZFP36L1Q07352 338 aaKnown RBP11.09□□□□□ -0.63
COPS7A-217ENST00000543537 ILF3Q12906 894 aaKnown RBP eCLIP11.09□□□□□ -0.63
COPS7A-217ENST00000543537 SQSTM1Q13501 440 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 TRMT5Q32P41 509 aaKnown RBP11.09□□□□□ -0.63
COPS7A-217ENST00000543537 XKR7Q5GH72 579 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 CACHD1Q5VU97 1274 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 METRNLQ641Q3 311 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 DCUN1D3Q8IWE4 304 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 SPACA3Q8IXA5 215 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 FAM46DQ8NEK8 389 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 OR9A1PQ8NGU1 263 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 CCL4L1Q8NHW4 92 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 AGR3Q8TD06 166 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 LKAAEAR1Q8TD35 194 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 SNRNP27Q8WVK2 155 aaKnown RBP11.09□□□□□ -0.63
COPS7A-217ENST00000543537 ZFPM2Q8WW38 1151 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 ZBTB18Q99592 522 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 HOPXQ9BPY8 73 aaPredicted RBP11.09□□□□□ -0.63
COPS7A-217ENST00000543537 EFCAB11Q9BUY7 163 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 GSDMCQ9BYG8 508 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 DPH1Q9BZG8 443 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 LRRN3Q9H3W5 708 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 ELOVL6Q9H5J4 265 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 ZNF385DQ9H6B1 395 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 WDR55Q9H6Y2 383 aaPredicted RBP11.09□□□□□ -0.63
COPS7A-217ENST00000543537 CARS2Q9HA77 564 aaKnown RBP11.09□□□□□ -0.63
COPS7A-217ENST00000543537 SLC40A1Q9NP59 571 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 SDR39U1Q9NRG7 319 aaPredicted RBP11.09□□□□□ -0.63
COPS7A-217ENST00000543537 KLC4Q9NSK0 619 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 NOP53Q9NZM5 478 aaKnown RBP11.09□□□□□ -0.63
COPS7A-217ENST00000543537 GULP1Q9UBP9 304 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 ACSL6Q9UKU0 697 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 SUFUQ9UMX1 484 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 SATB2Q9UPW6 733 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 TSC22D4Q9Y3Q8 395 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 ST14Q9Y5Y6 855 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 BPTFQ12830 3046 aa11.09□□□□□ -0.63
COPS7A-217ENST00000543537 KIF26BQ2KJY2 2108 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 C15orf38-AP3S2A0A0A6YYH1 394 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 PIP5K1BO14986 540 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 TAPBPO15533 448 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 SKAP2O75563 359 aaPredicted RBP11.08□□□□□ -0.64
COPS7A-217ENST00000543537 STAMBPO95630 424 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 SLC35G4P0C7Q5 338 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 PRR35P0CG20 571 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 PRPS2P11908 318 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 ZNF8P17098 575 aaPredicted RBP11.08□□□□□ -0.64
COPS7A-217ENST00000543537 IDSP22304 550 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 HRH2P25021 359 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 GSTM2P28161 218 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 GPR3P46089 330 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 GNPDA1P46926 289 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 CTSCP53634 463 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 CCL7P80098 99 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 FOXM1Q08050 763 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 LRRC74AQ0VAA2 488 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 CSTF3Q12996 717 aaKnown RBP11.08□□□□□ -0.64
COPS7A-217ENST00000543537 PHKG1Q16816 387 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 IMPG1Q17R60 797 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 MMEL1Q495T6 779 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 ZNF658BQ4V348 819 aaPredicted RBP11.08□□□□□ -0.64
COPS7A-217ENST00000543537 PDCD4Q53EL6 469 aaKnown RBP11.08□□□□□ -0.64
COPS7A-217ENST00000543537 SOWAHCQ53LP3 525 aaPredicted RBP11.08□□□□□ -0.64
COPS7A-217ENST00000543537 VWA5B1Q5TIE3 1220 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 CYB5D1Q6P9G0 228 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 AGTRAPQ6RW13 159 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 WASH2PQ6VEQ5 465 aa11.08□□□□□ -0.64
COPS7A-217ENST00000543537 NET1Q7Z628 596 aaPredicted RBP11.08□□□□□ -0.64
COPS7A-217ENST00000543537 SPRED1Q7Z699 444 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms