RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TMEM109Q9BVC6 243 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 SLC17A9Q9BYT1 436 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 BCL2L14Q9BZR8 327 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 THUMPD1Q9NXG2 353 aaKnown RBP6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 GRHL1Q9NZI5 618 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 FTSJ1Q9UET6 329 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 PLCL2Q9UPR0 1127 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 NUP98P52948 1817 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 MYH13Q9UKX3 1938 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 TCRBV7S3A2A0A539 114 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 LCHNA4D1U4 455 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 H0YGN5 161 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 AHSGP02765 367 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 KLK1P06870 262 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 C6P13671 934 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 CEBPBP17676 345 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 DRD4P21917 467 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 BPIFB3P59826 476 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ERVK-8P63133 956 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 LIPEQ05469 1076 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 TRIM16LQ309B1 348 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 Q5PR19 223 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 PLEKHS1Q5SXH7 462 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 SUSD1Q6UWL2 747 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 LRRTM3Q86VH5 581 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 CILP2Q8IUL8 1156 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 SVIPQ8NHG7 77 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 FAM81AQ8TBF8 368 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 FAM110BQ8TC76 370 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 LRRC20Q8TCA0 184 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 PIH1D2Q8WWB5 315 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 NSMCE3Q96MG7 304 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 PKP4Q99569 1192 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 LINC00597Q9H2U6 94 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 CRISPLD1Q9H336 500 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 TMLHEQ9NVH6 421 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 PLAGL1Q9UM63 463 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ALPPP05187 535 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 FABP3P05413 133 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 CD70P32970 193 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ELOAQ14241 798 aaKnown RBP6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 KCNJ11Q14654 390 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 MAPK11Q15759 364 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 SPANXN2Q5MJ10 180 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF57Q68EA5 555 aaPredicted RBP6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 PEG10Q86TG7 708 aaKnown RBP6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 PIM3Q86V86 326 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 RPLP0P6Q8NHW5 317 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 CRYGNQ8WXF5 182 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 S100PBPQ96BU1 408 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 UCN2Q96RP3 112 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF184Q99676 751 aaPredicted RBP6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 MUC13Q9H3R2 512 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 LDAHQ9H6V9 325 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 SDHAF3Q9NRP4 125 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 SLC17A6Q9P2U8 582 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 PNMA8CA0A1B0GUJ8 204 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 RAB19A4D1S5 217 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ELOA3DA6NLF2 546 aaPredicted RBP6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 FADS2P1A8MWK0 482 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 TNFRSF11BO00300 401 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ADAMDEC1O15204 470 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 JUPP14923 745 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 C4BPBP20851 252 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 PER3P56645 1201 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 IRF9Q00978 393 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 PCDH1Q08174 1060 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 SNAPC1Q16533 368 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ELOA3BQ3SY89 546 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ALG1LQ6GMV1 187 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 PTCRAQ6ISU1 281 aaPredicted RBP6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ARHGAP22Q7Z5H3 698 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ZER1Q7Z7L7 766 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ZC3H3Q8IXZ2 948 aaKnown RBP6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 APCDD1Q8J025 514 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 KDM1BQ8NB78 822 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 DDHD1Q8NEL9 900 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ELOA3Q8NG57 546 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 SLCO2A1Q92959 643 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 MMABQ96EY8 250 aaPredicted RBP6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 IMP4Q96G21 291 aaKnown RBP6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 TGM7Q96PF1 710 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 MNTQ99583 582 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 SPATA9Q9BWV2 254 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 SLC29A3Q9BZD2 475 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 NUAK2Q9H093 628 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ALG2Q9H553 416 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 FZD3Q9NPG1 666 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 IL1RAPQ9NPH3 570 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 PDLIM7Q9NR12 457 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 UTS2RQ9UKP6 389 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 PADI2Q9Y2J8 665 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 IRGMA1A4Y4 181 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 A6NLC8 198 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 G3V2T6 193 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 TRAPPC6AO75865 159 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 SCELO95171 688 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 APBB3O95704 486 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 PAHP00439 452 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ETS2P15036 469 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms