RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 CPT1CQ8TCG5 803 aa16.61■□□□□ 0.25
LTBR-210ENST00000542830 ATL1Q8WXF7 558 aa16.61■□□□□ 0.25
LTBR-210ENST00000542830 PNPLA2Q96AD5 504 aa16.61■□□□□ 0.25
LTBR-210ENST00000542830 MMABQ96EY8 250 aaPredicted RBP16.61■□□□□ 0.25
LTBR-210ENST00000542830 PDLIM5Q96HC4 596 aaKnown RBP16.61■□□□□ 0.25
LTBR-210ENST00000542830 OLFM1Q99784 485 aa16.61■□□□□ 0.25
LTBR-210ENST00000542830 ERP44Q9BS26 406 aa16.61■□□□□ 0.25
LTBR-210ENST00000542830 HAUS8Q9BT25 410 aa16.61■□□□□ 0.25
LTBR-210ENST00000542830 SGPP1Q9BX95 441 aa16.61■□□□□ 0.25
LTBR-210ENST00000542830 FAM129AQ9BZQ8 928 aa16.61■□□□□ 0.25
LTBR-210ENST00000542830 ATG10Q9H0Y0 220 aa16.61■□□□□ 0.25
LTBR-210ENST00000542830 ZNF552Q9H707 407 aaPredicted RBP16.61■□□□□ 0.25
LTBR-210ENST00000542830 SYNPO2LQ9H987 977 aa16.61■□□□□ 0.25
LTBR-210ENST00000542830 SLAMF7Q9NQ25 335 aa16.61■□□□□ 0.25
LTBR-210ENST00000542830 C14orf105Q9NVL8 296 aa16.61■□□□□ 0.25
LTBR-210ENST00000542830 ARL15Q9NXU5 204 aa16.61■□□□□ 0.25
LTBR-210ENST00000542830 C3orf18Q9UK00 162 aa16.61■□□□□ 0.25
LTBR-210ENST00000542830 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.61■□□□□ 0.25
LTBR-210ENST00000542830 PCDH17O14917 1159 aa16.6■□□□□ 0.25
LTBR-210ENST00000542830 EIF3HO15372 352 aaKnown RBP eCLIP16.6■□□□□ 0.25
LTBR-210ENST00000542830 ITGA3P26006 1051 aa16.6■□□□□ 0.25
LTBR-210ENST00000542830 GRK3P35626 688 aa16.6■□□□□ 0.25
LTBR-210ENST00000542830 SLC26A3P40879 764 aa16.6■□□□□ 0.25
LTBR-210ENST00000542830 ETF1P62495 437 aaKnown RBP16.6■□□□□ 0.25
LTBR-210ENST00000542830 FASTKD3Q14CZ7 662 aaKnown RBP16.6■□□□□ 0.25
LTBR-210ENST00000542830 SLC6A19Q695T7 634 aa16.6■□□□□ 0.25
LTBR-210ENST00000542830 IGFL3Q6UXB1 125 aa16.6■□□□□ 0.25
LTBR-210ENST00000542830 ZC3HC1Q86WB0 502 aaKnown RBP16.6■□□□□ 0.25
LTBR-210ENST00000542830 PLD3Q8IV08 490 aa16.6■□□□□ 0.25
LTBR-210ENST00000542830 ARHGEF39Q8N4T4 335 aa16.6■□□□□ 0.25
LTBR-210ENST00000542830 PYROXD1Q8WU10 500 aa16.6■□□□□ 0.25
LTBR-210ENST00000542830 ANKRD7Q92527 254 aa16.6■□□□□ 0.25
LTBR-210ENST00000542830 ALKBH8Q96BT7 664 aaKnown RBP16.6■□□□□ 0.25
LTBR-210ENST00000542830 YIPF2Q9BWQ6 316 aa16.6■□□□□ 0.25
LTBR-210ENST00000542830 MKKSQ9NPJ1 570 aaPredicted RBP16.6■□□□□ 0.25
LTBR-210ENST00000542830 TRPC4Q9UBN4 977 aa16.6■□□□□ 0.25
LTBR-210ENST00000542830 NOVA2Q9UNW9 492 aaKnown RBP16.6■□□□□ 0.25
LTBR-210ENST00000542830 MAP4K5Q9Y4K4 846 aa16.6■□□□□ 0.25
LTBR-210ENST00000542830 NUP210LQ5VU65 1888 aa16.59■□□□□ 0.25
LTBR-210ENST00000542830 UBR5O95071 2799 aaPredicted RBP16.59■□□□□ 0.25
LTBR-210ENST00000542830 MAP2K7O14733 419 aa16.59■□□□□ 0.25
LTBR-210ENST00000542830 P2RX6O15547 441 aa16.59■□□□□ 0.25
LTBR-210ENST00000542830 ACPPP15309 386 aa16.59■□□□□ 0.25
LTBR-210ENST00000542830 ZNF37AP17032 561 aaPredicted RBP16.59■□□□□ 0.25
LTBR-210ENST00000542830 AVPR1BP47901 424 aa16.59■□□□□ 0.25
LTBR-210ENST00000542830 CSNK1G2P78368 415 aa16.59■□□□□ 0.25
LTBR-210ENST00000542830 VWA2Q5GFL6 755 aa16.59■□□□□ 0.25
LTBR-210ENST00000542830 PRSS58Q8IYP2 241 aa16.59■□□□□ 0.25
LTBR-210ENST00000542830 NKAPQ8N5F7 415 aaKnown RBP16.59■□□□□ 0.25
LTBR-210ENST00000542830 CAMKVQ8NCB2 501 aa16.59■□□□□ 0.25
LTBR-210ENST00000542830 OR11G2Q8NGC1 345 aa16.59■□□□□ 0.25
LTBR-210ENST00000542830 OR56A3Q8NH54 315 aa16.59■□□□□ 0.25
LTBR-210ENST00000542830 CDKL2Q92772 493 aa16.59■□□□□ 0.25
LTBR-210ENST00000542830 FBXL8Q96CD0 374 aa16.59■□□□□ 0.25
LTBR-210ENST00000542830 VPS39Q96JC1 886 aa16.59■□□□□ 0.25
LTBR-210ENST00000542830 MFRPQ9BY79 579 aa16.59■□□□□ 0.25
LTBR-210ENST00000542830 TGIF2Q9GZN2 237 aa16.59■□□□□ 0.25
LTBR-210ENST00000542830 DPH5Q9H2P9 285 aa16.59■□□□□ 0.25
LTBR-210ENST00000542830 RHOJQ9H4E5 214 aa16.59■□□□□ 0.25
LTBR-210ENST00000542830 ASH1LQ9NR48 2969 aaKnown RBP16.59■□□□□ 0.25
LTBR-210ENST00000542830 RP1L1Q8IWN7 2480 aaPredicted RBP16.58■□□□□ 0.25
LTBR-210ENST00000542830 A0A0A6YYC8 382 aaPredicted RBP16.58■□□□□ 0.24
LTBR-210ENST00000542830 FAM95CA0A1B0GW59 222 aa16.58■□□□□ 0.24
LTBR-210ENST00000542830 H0YIG0 161 aa16.58■□□□□ 0.24
LTBR-210ENST00000542830 I3L1I5 382 aaPredicted RBP16.58■□□□□ 0.24
LTBR-210ENST00000542830 RAD51CO43502 376 aa16.58■□□□□ 0.24
LTBR-210ENST00000542830 FOXS1O43638 330 aa16.58■□□□□ 0.24
LTBR-210ENST00000542830 VPS4BO75351 444 aa16.58■□□□□ 0.24
LTBR-210ENST00000542830 HPP00738 406 aa16.58■□□□□ 0.24
LTBR-210ENST00000542830 NPPBP16860 134 aa16.58■□□□□ 0.24
LTBR-210ENST00000542830 CXCR2P25025 360 aa16.58■□□□□ 0.24
LTBR-210ENST00000542830 EMP2P54851 167 aa16.58■□□□□ 0.24
LTBR-210ENST00000542830 VN1R4Q7Z5H5 301 aa16.58■□□□□ 0.24
LTBR-210ENST00000542830 ZADH2Q8N4Q0 377 aa16.58■□□□□ 0.24
LTBR-210ENST00000542830 AMER3Q8N944 861 aa16.58■□□□□ 0.24
LTBR-210ENST00000542830 ABHD11Q8NFV4 315 aa16.58■□□□□ 0.24
LTBR-210ENST00000542830 LHPPQ9H008 270 aa16.58■□□□□ 0.24
LTBR-210ENST00000542830 VPS4AQ9UN37 437 aa16.58■□□□□ 0.24
LTBR-210ENST00000542830 B3GNT3Q9Y2A9 372 aa16.58■□□□□ 0.24
LTBR-210ENST00000542830 UTP11Q9Y3A2 253 aaKnown RBP16.58■□□□□ 0.24
LTBR-210ENST00000542830 PSAT1Q9Y617 370 aa16.58■□□□□ 0.24
LTBR-210ENST00000542830 IDSB3KWA1 339 aa16.57■□□□□ 0.24
LTBR-210ENST00000542830 MASP2O00187 686 aa16.57■□□□□ 0.24
LTBR-210ENST00000542830 NSA2O95478 260 aaKnown RBP16.57■□□□□ 0.24
LTBR-210ENST00000542830 GUCA1CO95843 209 aa16.57■□□□□ 0.24
LTBR-210ENST00000542830 CDH1P12830 882 aa16.57■□□□□ 0.24
LTBR-210ENST00000542830 SAT1P21673 171 aa16.57■□□□□ 0.24
LTBR-210ENST00000542830 CCR8P51685 355 aa16.57■□□□□ 0.24
LTBR-210ENST00000542830 MRPS25P82663 173 aaKnown RBP16.57■□□□□ 0.24
LTBR-210ENST00000542830 CAV1Q03135 178 aa16.57■□□□□ 0.24
LTBR-210ENST00000542830 C2orf54Q08AI8 447 aa16.57■□□□□ 0.24
LTBR-210ENST00000542830 AGAP7PQ5VUJ5 663 aa16.57■□□□□ 0.24
LTBR-210ENST00000542830 ATG9BQ674R7 924 aa16.57■□□□□ 0.24
LTBR-210ENST00000542830 SBSNQ6UWP8 590 aa16.57■□□□□ 0.24
LTBR-210ENST00000542830 SYT10Q6XYQ8 523 aa16.57■□□□□ 0.24
LTBR-210ENST00000542830 ASPGQ86U10 573 aa16.57■□□□□ 0.24
LTBR-210ENST00000542830 TBC1D19Q8N5T2 526 aa16.57■□□□□ 0.24
LTBR-210ENST00000542830 Q8NA96 180 aa16.57■□□□□ 0.24
LTBR-210ENST00000542830 GALNT11Q8NCW6 608 aa16.57■□□□□ 0.24
LTBR-210ENST00000542830 AGAP4Q96P64 663 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms