RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 ARHGEF33A8MVX0 844 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 UBOX5O94941 541 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 CD247P20963 164 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 CCR10P46092 362 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 HK3P52790 923 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 DGKQP52824 942 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 MRPL49Q13405 166 aaKnown RBP8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 COL9A2Q14055 689 aaPredicted RBP8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 TTMPQ5BVD1 217 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 AP1ARQ63HQ0 302 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 KCTD8Q6ZWB6 473 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 SLC38A2Q96QD8 506 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 TMEM168Q9H0V1 697 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 TFB2MQ9H5Q4 396 aaKnown RBP8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 SOX17Q9H6I2 414 aaPredicted RBP8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 ZCCHC3Q9NUD5 404 aaKnown RBP8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 ZNF282Q9UDV7 671 aaPredicted RBP8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 ACTL7AQ9Y615 435 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 SLC22A3O75751 556 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 METTL18O95568 372 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 HOXD13P35453 343 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 VHLP40337 213 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 LIMK2P53671 638 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 ERV3-1Q14264 604 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 SMU1Q2TAY7 513 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 GALNT18Q6P9A2 607 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 ARL10Q8N8L6 244 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 OR6N1Q8NGY5 312 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 ZNF483Q8TF39 744 aaPredicted RBP8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 SCN4AP35499 1836 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 CCDC187A0A096LP49 1063 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 CCNOP22674 350 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 CCR5P51681 352 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 CAPZA1P52907 286 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 UGT2B15P54855 530 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 SPIN4Q56A73 249 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 SLC9A4Q6AI14 798 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 VASH1Q7L8A9 365 aaPredicted RBP8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 SPATA19Q7Z5L4 167 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 SMRP1Q8NCR6 262 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 EEF1AKMT1Q8WVE0 214 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 IMP4Q96G21 291 aaKnown RBP8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 SIKE1Q9BRV8 207 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 MYLK2Q9H1R3 596 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 ZNF304Q9HCX3 659 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 POT1Q9NUX5 634 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 ATXN10Q9UBB4 475 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 CYTH4Q9UIA0 394 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 RAP2CQ9Y3L5 183 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 MAGEB3O15480 346 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 BPIP17213 487 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 PLP2Q04941 152 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 PCBP2Q15366 365 aaKnown RBP eCLIP8.37□□□□□ -1.071e-6■■■■■ 31.5
FNDC3A-206ENST00000541916 PTCHD3Q3KNS1 767 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 TTC33Q6PID6 262 aaPredicted RBP8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 HSD11B1LQ7Z5J1 315 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 MCATQ8IVS2 390 aaKnown RBP8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 ZNF786Q8N393 782 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 PNPLA1Q8N8W4 532 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 KYQ8NBH2 561 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 SH3YL1Q96HL8 342 aaPredicted RBP8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 ACSS3Q9H6R3 686 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 ARMCX1Q9P291 453 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 VPS29Q9UBQ0 182 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 RAB21Q9UL25 225 aa8.37□□□□□ -1.07
FNDC3A-206ENST00000541916 USP54Q70EL1 1684 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 MYOCOSA0A1B0GUC4 107 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 NPIPA2E9PIF3 369 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 NPIPA3F8WFD2 350 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 TOR1BO14657 336 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 MGRN1O60291 552 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 PEX14O75381 377 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 CYB5AP00167 134 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 NR2C1P13056 603 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 TMPPEQ6ZT21 453 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 DNAJC5GQ8N7S2 189 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 TEX47Q8TBZ9 253 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 ZBTB20Q9HC78 741 aaPredicted RBP8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 TAS2R9Q9NYW1 312 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 FBXO4Q9UKT5 387 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 CAMK2AQ9UQM7 478 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 MRPS2Q9Y399 296 aaKnown RBP8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 VIRMAQ69YN4 1812 aaKnown RBP8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 A0A1W2PRB8 838 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 NPIPB15A6NHN6 443 aaPredicted RBP8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 ALDOAP04075 364 aaKnown RBP8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 MPC1LP0DKB6 136 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 IL1RNP18510 177 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 TNFRSF8P28908 595 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 KCNC1P48547 511 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 DCDP81605 110 aaKnown RBP8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 NRG1Q02297 640 aaPredicted RBP8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 TOP3AQ13472 1001 aaPredicted RBP8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 KIR2DS3Q14952 304 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 KLHL12Q53G59 568 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 KIAA0907Q7Z7F0 614 aaPredicted RBP8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 C10orf107Q8IVU9 208 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 ETFBKMTQ8IXQ9 262 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 TWIST2Q8WVJ9 160 aa8.36□□□□□ -1.07
FNDC3A-206ENST00000541916 MRGPRX1Q96LB2 322 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms