RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 TNRC6CQ9HCJ0 1690 aaKnown RBP3.97□□□□□ -1.77
SNHG1-217ENST00000541578 CKAP5Q14008 2032 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 PPIP5K1Q6PFW1 1433 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 ABCC6O95255 1503 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 LINC01553A4QN01 128 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 GLTPD2A6NH11 291 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 CPLX1O14810 134 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 TXNL1O43396 289 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 PRPSAP2O60256 369 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 BCAS2O75934 225 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-217ENST00000541578 SOX30O94993 753 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 PLGP00747 810 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-217ENST00000541578 IGHV2-70P01814 119 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 IRF2P14316 349 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 CPA3P15088 417 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 TCF4P15884 667 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 FERP16591 822 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 LBPP18428 481 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 MPZP25189 248 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 SSTR2P30874 369 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 CORO1AP31146 461 aaKnown RBP3.97□□□□□ -1.77
SNHG1-217ENST00000541578 SLC6A6P31641 620 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 SERPINB6P35237 376 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 MNDAP41218 407 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 MMP15P51511 669 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 LUMP51884 338 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-217ENST00000541578 MFAP3P55082 362 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 POLR2FP61218 127 aaKnown RBP3.97□□□□□ -1.77
SNHG1-217ENST00000541578 EEF1A1P68104 462 aaKnown RBP3.97□□□□□ -1.77
SNHG1-217ENST00000541578 GALK2Q01415 458 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 EEF1A2Q05639 463 aaKnown RBP3.97□□□□□ -1.77
SNHG1-217ENST00000541578 TROAPQ12815 778 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 EEF1A1P5Q5VTE0 462 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 IRAK1BP1Q5VVH5 260 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 TRNP1Q6NT89 227 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 C8orf82Q6P1X6 216 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-217ENST00000541578 NOTUMQ6P988 496 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 RABEPKQ7Z6M1 372 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 TMPRSS11BQ86T26 416 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 SLC9B2Q86UD5 537 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 CROCCP3Q8IVE0 287 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 ZNF34Q8IZ26 560 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 CDK20Q8IZL9 346 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 LMO3Q8TAP4 145 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 CENPTQ96BT3 561 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 PGM2Q96G03 612 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 NEURL2Q9BR09 285 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 BTBD10Q9BSF8 475 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 NAPBQ9H115 298 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 CUEDC2Q9H467 287 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 C6orf106Q9H6K1 298 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-217ENST00000541578 LMAN1LQ9HAT1 526 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 FETUBQ9UGM5 382 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 AGO1Q9UL18 857 aaKnown RBP3.97□□□□□ -1.77
SNHG1-217ENST00000541578 JRKLQ9Y4A0 524 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 ANKRD36BQ8N2N9 1353 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 TAF1LQ8IZX4 1826 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 TUBGCP6Q96RT7 1819 aa3.97□□□□□ -1.77
SNHG1-217ENST00000541578 TMEM221A6NGB7 291 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 FLRT2O43155 660 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 ZNHIT1O43257 154 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 SNX3O60493 162 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 AKAP3O75969 853 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 GLCEO94923 617 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 SLC4A1P02730 911 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 CSN3P07498 182 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 SMIM18P0DKX4 95 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 IGHV4-30-4P0DP06 118 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 EPCAMP16422 314 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 CKMT2P17540 419 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 VCLP18206 1134 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 CBLP22681 906 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 PIK3R1P27986 724 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 PSMB4P28070 264 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 USP8P40818 1118 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 IL15P40933 162 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-217ENST00000541578 ART1P52961 327 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 SLC12A3P55017 1021 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 GMFBP60983 142 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 AKAP17AQ02040 695 aaKnown RBP3.96□□□□□ -1.78
SNHG1-217ENST00000541578 DHX34Q14147 1143 aaKnown RBP3.96□□□□□ -1.78
SNHG1-217ENST00000541578 OASLQ15646 514 aaKnown RBP3.96□□□□□ -1.78
SNHG1-217ENST00000541578 RBBP7Q16576 425 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 UGP2Q16851 508 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 CTU2Q2VPK5 515 aaKnown RBP3.96□□□□□ -1.78
SNHG1-217ENST00000541578 LACTB2Q53H82 288 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-217ENST00000541578 OR7E24Q6IFN5 339 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 ADCK1Q86TW2 530 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 NLRP14Q86W24 1093 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 PTOV1Q86YD1 416 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 SIAH3Q8IW03 269 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 CHERPQ8IWX8 916 aaKnown RBP3.96□□□□□ -1.78
SNHG1-217ENST00000541578 LMNTD2Q8IXW0 634 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 ARHGAP24Q8N264 748 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 CLIP4Q8N3C7 705 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 HDDC3Q8N4P3 179 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 CCDC63Q8NA47 563 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 PRCCQ92733 491 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-217ENST00000541578 CDCA5Q96FF9 252 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 C16orf45Q96MC5 204 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms