RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 TOR1BO14657 336 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 MITFO75030 526 aaPredicted RBP16.62■□□□□ 0.25
SPIDR-227ENST00000541342 B3GALT4O96024 378 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 OTCP00480 354 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 EPS8Q12929 822 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 RAPSNQ13702 412 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 TMEM184AQ6ZMB5 413 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 LIX1Q8N485 282 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 TRAM1L1Q8N609 369 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 FAM162AQ96A26 154 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 ERLEC1Q96DZ1 483 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 WRAP53Q9BUR4 548 aaKnown RBP16.62■□□□□ 0.25
SPIDR-227ENST00000541342 CLMPQ9H6B4 373 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 NFKBIL1Q9UBC1 381 aaPredicted RBP16.62■□□□□ 0.25
SPIDR-227ENST00000541342 PMF1-BGLAPU3KQ54 211 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 KRBA1A5PL33 1030 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 ELFN1P0C7U0 828 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 RAD23AP54725 363 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 TPD52P55327 224 aaPredicted RBP16.62■□□□□ 0.25
SPIDR-227ENST00000541342 ANKRD54Q6NXT1 300 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 MILR1Q7Z6M3 343 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 BEND7Q8N7W2 519 aaPredicted RBP16.62■□□□□ 0.25
SPIDR-227ENST00000541342 PPP3R2Q96LZ3 170 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 MYADMQ96S97 322 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 FAM129BQ96TA1 746 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 KLHL42Q9P2K6 505 aa16.62■□□□□ 0.25
SPIDR-227ENST00000541342 PAIP2BQ9ULR5 123 aaKnown RBP16.62■□□□□ 0.25
SPIDR-227ENST00000541342 TNPO3Q9Y5L0 923 aaKnown RBP16.62■□□□□ 0.25
SPIDR-227ENST00000541342 EDDM13A0A1B0GTR0 161 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 CLDN25C9JDP6 229 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 SLC16A6O15403 523 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 GMNNO75496 209 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 JRKO75564 520 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 CBSLP0DN79 551 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 CBSP35520 551 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 HPCAL1P37235 193 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 CDK5R2Q13319 367 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 ADPRMQ3LIE5 342 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 GCNT7Q6ZNI0 430 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 CALHM3Q86XJ0 350 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 ZFP90Q8TF47 636 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 MROQ9BYG7 248 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 SERHLQ9NQF3 203 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 PCDHB14Q9Y5E9 798 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 GNGT2O14610 69 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 CREG1O75629 220 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 GABARAPO95166 117 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 PRNPP04156 253 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 S100BP04271 92 aaPredicted RBP16.61■□□□□ 0.25
SPIDR-227ENST00000541342 RETP07949 1114 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 HSPA14Q0VDF9 509 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 EIF4HQ15056 248 aaKnown RBP16.61■□□□□ 0.25
SPIDR-227ENST00000541342 ERAP2Q6P179 960 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 MICU2Q8IYU8 434 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 ZCCHC7Q8N3Z6 543 aaKnown RBP16.61■□□□□ 0.25
SPIDR-227ENST00000541342 OR5K1Q8NHB7 308 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 CLHC1Q8NHS4 586 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 NDNFQ8TB73 568 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 TAMM41Q96BW9 452 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 CCDC138Q96M89 665 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 ZSCAN5AQ9BUG6 496 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 BTBD2Q9BX70 525 aa16.61■□□□□ 0.25
SPIDR-227ENST00000541342 NDUFS2O75306 463 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 SCELO95171 688 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 RYKP34925 604 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 GJA4P35212 333 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 RUNX3Q13761 415 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 ACOX1Q15067 660 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 ZNF551Q7Z340 670 aaPredicted RBP16.6■□□□□ 0.25
SPIDR-227ENST00000541342 CYP4Z1Q86W10 505 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 ZNF566Q969W8 418 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 EGFL8Q99944 293 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 KXD1Q9BQD3 176 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 RHNO1Q9BSD3 238 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 PCDHGB1Q9Y5G3 927 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 COQ9O75208 318 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 SERPINA1P01009 418 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 C1QCP02747 245 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 HOXB9P17482 250 aaPredicted RBP16.6■□□□□ 0.25
SPIDR-227ENST00000541342 ITGB7P26010 798 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 PTPN6P29350 595 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 RPS3AP61247 264 aaKnown RBP16.6■□□□□ 0.25
SPIDR-227ENST00000541342 LAPTM4AQ15012 233 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 TMIEQ8NEW7 156 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 OR8D1Q8WZ84 308 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 RDH14Q9HBH5 336 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 C3orf18Q9UK00 162 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 DENND4AQ7Z401 1863 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 TBC1D3BA6NDS4 549 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 ZNF99A8MXY4 864 aaPredicted RBP16.6■□□□□ 0.25
SPIDR-227ENST00000541342 BOP1Q14137 746 aaKnown RBP16.6■□□□□ 0.25
SPIDR-227ENST00000541342 RAB30Q15771 203 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 B3GNT8Q7Z7M8 397 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 EID3Q8N140 333 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 MFSD4AQ8N468 514 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 BTN2A2Q8WVV5 523 aa16.6■□□□□ 0.25
SPIDR-227ENST00000541342 TRIT1Q9H3H1 467 aaKnown RBP16.6■□□□□ 0.25
SPIDR-227ENST00000541342 OR2AG2A6NM03 316 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 CCDC159P0C7I6 412 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 MSH3P20585 1137 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms