RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 SPIN4Q56A73 249 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 RUNDC3AQ59EK9 446 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 CADM3Q8N126 398 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 TXNDC15Q96J42 360 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 FAIM2Q9BWQ8 316 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 UCK2Q9BZX2 261 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.64□□□□□ -0.392e-6■■■■□ 22.1
DNMT1-203ENST00000540357 ARFGEF1Q9Y6D6 1849 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 IQCF5A8MTL0 148 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 ARHGEF33A8MVX0 844 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 STSP08842 583 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 ERP29P30040 261 aaKnown RBP12.64□□□□□ -0.39
DNMT1-203ENST00000540357 AP1S2P56377 157 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 TRIM71Q2Q1W2 868 aaKnown RBP12.64□□□□□ -0.39
DNMT1-203ENST00000540357 AQP11Q8NBQ7 271 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 IL4I1Q96RQ9 567 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 RETREG1Q9H6L5 497 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 ERVK13-1Q9NX77 482 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 MYCP01106 439 aaPredicted RBP12.64□□□□□ -0.39
DNMT1-203ENST00000540357 IFNA7P01567 189 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 HTR6P50406 440 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 APLP1P51693 650 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 PIK3R6Q5UE93 754 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 TMPRSS11BQ86T26 416 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 SNX29P2Q8IUI4 249 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 GJD3Q8N144 294 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 JPH3Q8WXH2 748 aaPredicted RBP12.64□□□□□ -0.39
DNMT1-203ENST00000540357 SLC35A5Q9BS91 424 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 TXNRD2Q9NNW7 524 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 SPG21Q9NZD8 308 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 ENTPD4Q9Y227 616 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 UBE2QL1A1L167 161 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 SH3D21A4FU49 640 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 TBX18O95935 607 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 IFI30P13284 250 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 NOS3P29474 1203 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 TAS2R41P59536 307 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 DENND6BQ8NEG7 585 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 OPN1SWP03999 348 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 BUD31P41223 144 aaPredicted RBP12.63□□□□□ -0.39
DNMT1-203ENST00000540357 ZNF630Q2M218 657 aaPredicted RBP12.63□□□□□ -0.39
DNMT1-203ENST00000540357 SETMARQ53H47 684 aaPredicted RBP12.63□□□□□ -0.39
DNMT1-203ENST00000540357 LETMD1Q6P1Q0 360 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 NPAS3Q8IXF0 933 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 SLITRK2Q9H156 845 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 FCF1Q9Y324 198 aaKnown RBP12.63□□□□□ -0.39
DNMT1-203ENST00000540357 WASH4PA8MWX3 477 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 HRH2P25021 359 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 CASP3P42574 277 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 MAPK12P53778 367 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 SMAD3P84022 425 aaKnown RBP12.63□□□□□ -0.39
DNMT1-203ENST00000540357 DUSP4Q13115 394 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 TARDBPQ13148 414 aaKnown RBP eCLIP12.63□□□□□ -0.392e-7■■■■□ 23.9
DNMT1-203ENST00000540357 SEMA3BQ13214 749 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 RAVER1Q8IY67 606 aaKnown RBP12.63□□□□□ -0.39
DNMT1-203ENST00000540357 ELMOD2Q8IZ81 293 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 TMEM169Q96HH4 297 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 ZBED3Q96IU2 234 aaPredicted RBP12.63□□□□□ -0.39
DNMT1-203ENST00000540357 MTERF1Q99551 399 aaKnown RBP12.63□□□□□ -0.39
DNMT1-203ENST00000540357 ZDHHC3Q9NYG2 299 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 SLAMF8Q9P0V8 285 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 NHSL1Q5SYE7 1610 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 SLC16A6O15403 523 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 LDB2O43679 373 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 PCDH7O60245 1069 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 SBK3P0C264 359 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 CCNYL3P0C7X3 344 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 SLC6A4P31645 630 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 UGT2B10P36537 528 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 SELPLGQ14242 412 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 GPR162Q16538 588 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 BTBD16Q32M84 506 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 RAB41Q5JT25 222 aa12.63□□□□□ -0.39
DNMT1-203ENST00000540357 C11orf24Q96F05 449 aaPredicted RBP12.63□□□□□ -0.39
DNMT1-203ENST00000540357 SHANK3Q9BYB0 1731 aa12.62□□□□□ -0.39
DNMT1-203ENST00000540357 A0A1W2PQ67 120 aa12.62□□□□□ -0.39
DNMT1-203ENST00000540357 TRBC2A0A5B9 178 aa12.62□□□□□ -0.39
DNMT1-203ENST00000540357 ZNF792Q3KQV3 632 aa12.62□□□□□ -0.39
DNMT1-203ENST00000540357 GPAT3Q53EU6 434 aa12.62□□□□□ -0.39
DNMT1-203ENST00000540357 MOB2Q70IA6 237 aa12.62□□□□□ -0.39
DNMT1-203ENST00000540357 PARP16Q8N5Y8 322 aa12.62□□□□□ -0.39
DNMT1-203ENST00000540357 BEND7Q8N7W2 519 aaPredicted RBP12.62□□□□□ -0.39
DNMT1-203ENST00000540357 ZNF557Q8N988 423 aaPredicted RBP12.62□□□□□ -0.39
DNMT1-203ENST00000540357 GANCQ8TET4 914 aa12.62□□□□□ -0.39
DNMT1-203ENST00000540357 PSKH2Q96QS6 385 aa12.62□□□□□ -0.39
DNMT1-203ENST00000540357 EPYCQ99645 322 aa12.62□□□□□ -0.39
DNMT1-203ENST00000540357 DOK1Q99704 481 aa12.62□□□□□ -0.39
DNMT1-203ENST00000540357 KIAA1522Q9P206 1035 aaPredicted RBP12.62□□□□□ -0.39
DNMT1-203ENST00000540357 PFDN2Q9UHV9 154 aa12.62□□□□□ -0.39
DNMT1-203ENST00000540357 HSPB11Q9Y547 144 aa12.62□□□□□ -0.39
DNMT1-203ENST00000540357 MYH9P35579 1960 aaKnown RBP12.62□□□□□ -0.39
DNMT1-203ENST00000540357 PDYNP01213 254 aa12.62□□□□□ -0.39
DNMT1-203ENST00000540357 FGBP02675 491 aa12.62□□□□□ -0.39
DNMT1-203ENST00000540357 PRG2P13727 222 aa12.62□□□□□ -0.39
DNMT1-203ENST00000540357 PRDX3P30048 256 aaKnown RBP12.62□□□□□ -0.39
DNMT1-203ENST00000540357 CDK6Q00534 326 aa12.62□□□□□ -0.39
DNMT1-203ENST00000540357 PPIGQ13427 754 aaKnown RBP eCLIP12.62□□□□□ -0.395e-7■■□□□ 13.7
DNMT1-203ENST00000540357 TBCEQ15813 527 aaPredicted RBP12.62□□□□□ -0.39
DNMT1-203ENST00000540357 NOXRED1Q6NXP6 359 aa12.62□□□□□ -0.39
DNMT1-203ENST00000540357 USP7Q93009 1102 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms