RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 OR56A4Q8NGH8 313 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 DNAJB14Q8TBM8 379 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 FAM110BQ8TC76 370 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 STK35Q8TDR2 534 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 ANKRD49Q8WVL7 239 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 PIK3R3Q92569 461 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 SLC38A4Q969I6 547 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 LGALS12Q96DT0 336 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 IMP4Q96G21 291 aaKnown RBP7.44□□□□□ -1.22
CCDC60-204ENST00000539847 ZC3H10Q96K80 434 aaKnown RBP7.44□□□□□ -1.22
CCDC60-204ENST00000539847 C1orf74Q96LT6 269 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 CEP295NLQ96MC4 621 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 ZNF583Q96ND8 569 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 TM9SF2Q99805 663 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 APOL2Q9BQE5 337 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 AMBRA1Q9C0C7 1298 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 NACA2Q9H009 215 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 DSN1Q9H410 356 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 TUBB1Q9H4B7 451 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 DPEP3Q9H4B8 488 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 ALG9Q9H6U8 611 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 IL1RL2Q9HB29 575 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 GOLGA2P5Q9HBQ8 144 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 ACSS2Q9NR19 701 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 PLCXD1Q9NUJ7 323 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 POLR3BQ9NW08 1133 aaPredicted RBP7.44□□□□□ -1.22
CCDC60-204ENST00000539847 ASIC5Q9NY37 505 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 DKK3Q9UBP4 350 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 DSEQ9UL01 958 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 BTRCQ9Y297 605 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 YIPF1Q9Y548 306 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 COL4A3Q01955 1670 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 IGF2RP11717 2491 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 SPAG17Q6Q759 2223 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 ATP6AP2A0A1C7CYW4 349 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 TMEM8BA6NDV4 472 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 AGAP5A6NIR3 686 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 ATP6AP2O75787 350 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 INMTO95050 263 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 CST1P01037 141 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 IGLV3-25P01717 112 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 KRT6AP02538 564 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 APOA1P02647 267 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 KRT6BP04259 564 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 PROS1P07225 676 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 TYMPP19971 482 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 IGFBP6P24592 240 aaPredicted RBP7.43□□□□□ -1.22
CCDC60-204ENST00000539847 MAGEA2P43356 314 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 CDKN1CP49918 316 aaPredicted RBP7.43□□□□□ -1.22
CCDC60-204ENST00000539847 TPTEP56180 551 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 OR4D2P58180 307 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 PITX1P78337 314 aaPredicted RBP7.43□□□□□ -1.22
CCDC60-204ENST00000539847 IFITM2Q01629 132 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 CHRNEQ04844 493 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 YWHAHQ04917 246 aaPredicted RBP7.43□□□□□ -1.22
CCDC60-204ENST00000539847 MAD2L1Q13257 205 aaPredicted RBP7.43□□□□□ -1.22
CCDC60-204ENST00000539847 TEAD2Q15562 447 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 LPAL2Q16609 132 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 MEP1AQ16819 746 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 CTU2Q2VPK5 515 aaKnown RBP7.43□□□□□ -1.22
CCDC60-204ENST00000539847 ZIK1Q3SY52 487 aaPredicted RBP7.43□□□□□ -1.22
CCDC60-204ENST00000539847 ZNF404Q494X3 552 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 FBXO43Q4G163 708 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 TIGD2Q4W5G0 525 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 ARHGAP15Q53QZ3 475 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 TM4SF20Q53R12 229 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 RABL3Q5HYI8 236 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 C6orf136Q5SQH8 315 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 OTUD3Q5T2D3 398 aaPredicted RBP7.43□□□□□ -1.22
CCDC60-204ENST00000539847 GPR158Q5T848 1215 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 CAPN13Q6MZZ7 669 aaPredicted RBP7.43□□□□□ -1.22
CCDC60-204ENST00000539847 ERAP2Q6P179 960 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 SHQ1Q6PI26 577 aaKnown RBP7.43□□□□□ -1.22
CCDC60-204ENST00000539847 TMEM207Q6UWW9 146 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 CLEC20AQ6ZU45 233 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 CHST15Q7LFX5 561 aaPredicted RBP7.43□□□□□ -1.22
CCDC60-204ENST00000539847 C11orf74Q86VG3 221 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 FAM9CQ8IZT9 166 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 SPATA6LQ8N4H0 392 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 DTWD1Q8N5C7 304 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 TEX26Q8N6G2 289 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 AMER2Q8N7J2 671 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 ARL10Q8N8L6 244 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 IPMKQ8NFU5 416 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 ANGPTL6Q8NI99 470 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 SETD6Q8TBK2 473 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 PROKR1Q8TCW9 393 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 TTC9Q92623 222 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 TRIM63Q969Q1 353 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 PSMG2Q969U7 264 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 PTERQ96BW5 349 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 SIGLEC11Q96RL6 698 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 ZNF382Q96SR6 550 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 SEPHS2Q99611 448 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 APOL4Q9BPW4 351 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 AARSD1Q9BTE6 412 aaKnown RBP7.43□□□□□ -1.22
CCDC60-204ENST00000539847 TRAF4Q9BUZ4 470 aaPredicted RBP7.43□□□□□ -1.22
CCDC60-204ENST00000539847 BTBD2Q9BX70 525 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 FSD1LQ9BXM9 530 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 ULBP1Q9BZM6 244 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms