RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 C17orf113A0A1B0GUU1 675 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 HMX2A2RU54 273 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 PDZK1P1A8MUH7 402 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 FOXO6A8MYZ6 492 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 GLRA3O75311 464 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 LTA4HP09960 611 aaKnown RBP12□□□□□ -0.49
CLSTN3-208ENST00000538933 CCDC166P0CW27 439 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 CBSLP0DN79 551 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 ENO3P13929 434 aaPredicted RBP12□□□□□ -0.49
CLSTN3-208ENST00000538933 EDN3P14138 238 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 ZNF37AP17032 561 aaPredicted RBP12□□□□□ -0.49
CLSTN3-208ENST00000538933 IDSP22304 550 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 AOAHP28039 575 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 CCR7P32248 378 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 CBSP35520 551 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 CLCN7P51798 805 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 SOX8P57073 446 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 MAGOHP61326 146 aaKnown RBP12□□□□□ -0.49
CLSTN3-208ENST00000538933 PLOD1Q02809 727 aaPredicted RBP12□□□□□ -0.49
CLSTN3-208ENST00000538933 ZKSCAN8Q15776 578 aaPredicted RBP12□□□□□ -0.49
CLSTN3-208ENST00000538933 FAM83EQ2M2I3 478 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 TSNAXIP1Q2TAA8 658 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 PRAMEF17Q5VTA0 474 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 AGAP9Q5VTM2 703 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 PAQR3Q6TCH7 311 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 FAM198BQ6UWH4 519 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 FJX1Q86VR8 437 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 CCDC63Q8NA47 563 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 GRHL3Q8TE85 626 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 ARL8AQ96BM9 186 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 LINGO1Q96FE5 620 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 LINC00615Q96LM1 132 aaPredicted RBP12□□□□□ -0.49
CLSTN3-208ENST00000538933 FOPNLQ96NB1 174 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 MAP3K3Q99759 626 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 SH3GL2Q99962 352 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 SELENOSQ9BQE4 189 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 COG4Q9H9E3 785 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 KLHL42Q9P2K6 505 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 DCDC2Q9UHG0 476 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 CSAG2Q9Y5P2 127 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 OR52A4PA6NMU1 304 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 IFRD1O00458 451 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 SGTAO43765 313 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 PRICKLE3O43900 615 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 SPAG7O75391 227 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 KLK3P07288 261 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 SNRPB2P08579 225 aaKnown RBP11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 SLC35G4P0C7Q5 338 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 SLC35E2BP0CK96 405 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 COL6A2P12110 1019 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 HPDP32754 393 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 PGGT1BP53609 377 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 ATP6V0D1P61421 351 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 HSD11B2P80365 405 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 NFE2L1Q14494 772 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 GPR19Q15760 415 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 ZNF630Q2M218 657 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 ACSBG2Q5FVE4 666 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 WASH2PQ6VEQ5 465 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 FRA10AC1Q70Z53 315 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 EXOC3L1Q86VI1 746 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 KMT5CQ86Y97 462 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 TMEM126BQ8IUX1 230 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 ZNF547Q8IVP9 402 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 TRIM48Q8IWZ4 208 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 GALNT16Q8N428 558 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 MZB1Q8WU39 189 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 KCTD4Q8WVF5 259 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 FAR1Q8WVX9 515 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 ISL2Q96A47 359 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 APOPT1Q96IL0 206 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 NMRAL1Q9HBL8 299 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 POT1Q9NUX5 634 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 GALPQ9UBC7 116 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 GRID1Q9ULK0 1009 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 RUVBL2Q9Y230 463 aaKnown RBP11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 ACTL7BQ9Y614 415 aa11.99□□□□□ -0.49
CLSTN3-208ENST00000538933 CACNA1CQ13936 2221 aa11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 EIF3FO00303 357 aaPredicted RBP11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 KLF7O75840 302 aaPredicted RBP11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 KLHL2O95198 593 aa11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 SYF2O95926 243 aaKnown RBP11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 GSTA1P08263 222 aa11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 MPC1LP0DKB6 136 aa11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 SLC26A3P40879 764 aa11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 CCNFP41002 786 aa11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 HALP42357 657 aa11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 MAGEA12P43365 314 aa11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 PREPP48147 710 aa11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 IRF9Q00978 393 aa11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 RPA4Q13156 261 aa11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 KRT33BQ14525 404 aa11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 TTMPQ5BVD1 217 aa11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 DCAF10Q5QP82 559 aa11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 MRGPREQ86SM8 312 aa11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 LCA5Q86VQ0 697 aa11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 RBM12BQ8IXT5 1001 aaKnown RBP11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 SPATA6LQ8N4H0 392 aa11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 ZADH2Q8N4Q0 377 aa11.98□□□□□ -0.49
CLSTN3-208ENST00000538933 OR8K5Q8NH50 307 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms