RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 PTPRBP23467 1997 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 PIP5K1BO14986 540 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 CCDC22O60826 627 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 KATNA1O75449 491 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 KCNK5O95279 499 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 SERPINA6P08185 405 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 EPB42P16452 691 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 CCND1P24385 295 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 ARL1P40616 181 aaPredicted RBP16.56■□□□□ 0.24
CLN6-202ENST00000538696 YBX1P67809 324 aaKnown RBP16.56■□□□□ 0.24
CLN6-202ENST00000538696 SIM1P81133 766 aaPredicted RBP16.56■□□□□ 0.24
CLN6-202ENST00000538696 E2F1Q01094 437 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 INSM1Q01101 510 aaPredicted RBP16.56■□□□□ 0.24
CLN6-202ENST00000538696 UBAP2LQ14157 1087 aaKnown RBP16.56■□□□□ 0.24
CLN6-202ENST00000538696 SPIDRQ14159 915 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 SLC5A12Q1EHB4 618 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 LACTB2Q53H82 288 aaPredicted RBP16.56■□□□□ 0.24
CLN6-202ENST00000538696 TCHHL1Q5QJ38 904 aaPredicted RBP16.56■□□□□ 0.24
CLN6-202ENST00000538696 THEMIS2Q5TEJ8 643 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 FAM91A1Q658Y4 838 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 TMEM71Q6P5X7 295 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 LCTLQ6UWM7 567 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 ZNF574Q6ZN55 896 aaPredicted RBP16.56■□□□□ 0.24
CLN6-202ENST00000538696 FAM92BQ6ZTR7 304 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 YTHDF3Q7Z739 585 aaKnown RBP16.56■□□□□ 0.24
CLN6-202ENST00000538696 PLXDC1Q8IUK5 500 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 CDYL2Q8N8U2 506 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 WDR48Q8TAF3 677 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 SLC22A18Q96BI1 424 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 C19orf60Q96EN9 201 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 MIPEPQ99797 713 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 KLHL3Q9UH77 587 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 SLC22A14Q9Y267 594 aa16.56■□□□□ 0.24
CLN6-202ENST00000538696 CNOT1A5YKK6 2376 aaKnown RBP16.56■□□□□ 0.24
CLN6-202ENST00000538696 KIF1CO43896 1103 aaKnown RBP16.55■□□□□ 0.24
CLN6-202ENST00000538696 CAPN1P07384 714 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 UROSP10746 265 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 HTR6P50406 440 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 PDX1P52945 283 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 CLDN6P56747 220 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 BNIP1Q12981 228 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 CDCP2Q5VXM1 449 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 ICE2Q659A1 982 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 NXNQ6DKJ4 435 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 DHRS13Q6UX07 377 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 MILR1Q7Z6M3 343 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 SLITRK4Q8IW52 837 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 OR2L3Q8NG85 312 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 OR4D9Q8NGE8 314 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 ACTRT2Q8TDY3 377 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 ZDHHC12Q96GR4 267 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 C3orf30Q96M34 536 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 CD180Q99467 661 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 MAP3K3Q99759 626 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 DPYSL5Q9BPU6 564 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 SLC6A20Q9NP91 592 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 SAR1AQ9NR31 198 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 ARL8BQ9NVJ2 186 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 TRPS1Q9UHF7 1281 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 PIEZO1Q92508 2521 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 DMXL1Q9Y485 3027 aa16.55■□□□□ 0.24
CLN6-202ENST00000538696 MDC1Q14676 2089 aaKnown RBP16.54■□□□□ 0.24
CLN6-202ENST00000538696 A0A0J9YY10 115 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 TLCD2A6NGC4 264 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 ANKRD65E5RJM6 399 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 PRAMEF4O60810 478 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 ENO1P06733 434 aaKnown RBP16.54■□□□□ 0.24
CLN6-202ENST00000538696 THRAP10827 490 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 PVRP15151 417 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 NPPBP16860 134 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 SDHBP21912 280 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 SF1Q15637 639 aaKnown RBP16.54■□□□□ 0.24
CLN6-202ENST00000538696 KIF26BQ2KJY2 2108 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 PRAMEF9Q5VWM5 478 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 KIAA1614Q5VZ46 1190 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 TMEM198Q66K66 360 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 SCIMPQ6UWF3 145 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 PRSS42Q7Z5A4 293 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 B3GNT8Q7Z7M8 397 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 TREML1Q86YW5 311 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 DDIASQ8IXT1 998 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 GBP7Q8N8V2 638 aaPredicted RBP16.54■□□□□ 0.24
CLN6-202ENST00000538696 CCDC74BQ96LY2 380 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 HAUS8Q9BT25 410 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 NTMT1Q9BV86 223 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 PCBD2Q9H0N5 130 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 SEMA6CQ9H3T2 930 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 CUEDC1Q9NWM3 386 aaPredicted RBP16.54■□□□□ 0.24
CLN6-202ENST00000538696 DLL3Q9NYJ7 618 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 PDP2Q9P2J9 529 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 G3BP2Q9UN86 482 aaKnown RBP16.54■□□□□ 0.24
CLN6-202ENST00000538696 KLHL20Q9Y2M5 609 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 RNF11Q9Y3C5 154 aa16.54■□□□□ 0.24
CLN6-202ENST00000538696 IGKV1-8A0A0C4DH67 115 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 IGHV5-10-1A0A0J9YXX1 117 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 DCDC2BA2VCK2 349 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 CCNDBP1O95273 360 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 CBX6O95503 412 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 LINC00032P0C843 101 aa16.53■□□□□ 0.24
CLN6-202ENST00000538696 EBLN1P0CF75 366 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms