RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 RPS15AP62244 130 aaKnown RBP14.08□□□□□ -0.16
USP28-204ENST00000537642 SNRPNP63162 240 aaKnown RBP14.08□□□□□ -0.16
USP28-204ENST00000537642 TLE1Q04724 770 aa14.08□□□□□ -0.16
USP28-204ENST00000537642 DCAF10Q5QP82 559 aa14.08□□□□□ -0.16
USP28-204ENST00000537642 GARNL3Q5VVW2 1013 aa14.08□□□□□ -0.16
USP28-204ENST00000537642 CAPN13Q6MZZ7 669 aaPredicted RBP14.08□□□□□ -0.16
USP28-204ENST00000537642 VN1R4Q7Z5H5 301 aa14.08□□□□□ -0.16
USP28-204ENST00000537642 CCDC25Q86WR0 208 aa14.08□□□□□ -0.16
USP28-204ENST00000537642 ANKRD7Q92527 254 aa14.08□□□□□ -0.16
USP28-204ENST00000537642 CDKL2Q92772 493 aa14.08□□□□□ -0.16
USP28-204ENST00000537642 PYCR2Q96C36 320 aa14.08□□□□□ -0.16
USP28-204ENST00000537642 MVB12AQ96EY5 273 aa14.08□□□□□ -0.16
USP28-204ENST00000537642 FER1L6-AS2Q96M78 137 aa14.08□□□□□ -0.16
USP28-204ENST00000537642 OR4K3Q96R72 315 aa14.08□□□□□ -0.16
USP28-204ENST00000537642 LRRC1Q9BTT6 524 aa14.08□□□□□ -0.16
USP28-204ENST00000537642 NUDT9Q9BW91 350 aa14.08□□□□□ -0.16
USP28-204ENST00000537642 NXT1Q9UKK6 140 aaKnown RBP14.08□□□□□ -0.16
USP28-204ENST00000537642 CDC14AQ9UNH5 594 aa14.08□□□□□ -0.16
USP28-204ENST00000537642 NOVA2Q9UNW9 492 aaKnown RBP14.08□□□□□ -0.16
USP28-204ENST00000537642 SCN3AQ9NY46 2000 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 NBASA2RRP1 2371 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 IGLV3-12A0A075B6K2 115 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 KCNE1BA0A087WTH5 132 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 FEZF1A0PJY2 475 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 PABPN1LA6NDY0 278 aaKnown RBP14.07□□□□□ -0.16
USP28-204ENST00000537642 AGPSO00116 658 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 TXNDC9O14530 226 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 SOCS6O14544 535 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 FOXS1O43638 330 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 MAGEA4P43358 317 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 POU4F1Q01851 419 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 ILF2Q12905 390 aaKnown RBP14.07□□□□□ -0.16
USP28-204ENST00000537642 DSG2Q14126 1118 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 WHAMMP3Q1A5X7 153 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 C8orf74Q6P047 294 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 TEX19Q8NA77 164 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 STT3BQ8TCJ2 826 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 ATL1Q8WXF7 558 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 NACC2Q96BF6 587 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 GPR22Q99680 433 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 RBBP8Q99708 897 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 CPNE1Q99829 537 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 HAUS8Q9BT25 410 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 CAB39LQ9H9S4 337 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 POPDC3Q9HBV1 291 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 LRRC4CQ9HCJ2 640 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 GPAMQ9HCL2 828 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 ZNF282Q9UDV7 671 aaPredicted RBP14.07□□□□□ -0.16
USP28-204ENST00000537642 MRPS2Q9Y399 296 aaKnown RBP14.07□□□□□ -0.16
USP28-204ENST00000537642 HS3ST3B1Q9Y662 390 aa14.07□□□□□ -0.16
USP28-204ENST00000537642 A0A0A6YYC8 382 aaPredicted RBP14.06□□□□□ -0.16
USP28-204ENST00000537642 I3L1I5 382 aaPredicted RBP14.06□□□□□ -0.16
USP28-204ENST00000537642 FFAR3O14843 346 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 GPR42O15529 346 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 LCMT2O60294 686 aaKnown RBP14.06□□□□□ -0.16
USP28-204ENST00000537642 WISP1O95388 367 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 IGHEP01854 428 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 ZGLP1P0C6A0 271 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 GP5P40197 560 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 SLC26A3P40879 764 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 BCL6P41182 706 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 SLC12A2P55011 1212 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 GUCY2DQ02846 1103 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 OCA2Q04671 838 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 KLC1Q07866 573 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 RAPSNQ13702 412 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 FAM53BQ14153 422 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 TSNQ15631 228 aaKnown RBP14.06□□□□□ -0.16
USP28-204ENST00000537642 KBTBD12Q3ZCT8 623 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 VWA2Q5GFL6 755 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 KIRREL2Q6UWL6 708 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 PRSS58Q8IYP2 241 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 AMER3Q8N944 861 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 CLEC1AQ8NC01 280 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 ABHD11Q8NFV4 315 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 ZNF592Q92610 1267 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 MIEF2Q96C03 454 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 TM4SF19Q96DZ7 209 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 THAP11Q96EK4 314 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 MMABQ96EY8 250 aaPredicted RBP14.06□□□□□ -0.16
USP28-204ENST00000537642 SMAD5Q99717 465 aaKnown RBP14.06□□□□□ -0.16
USP28-204ENST00000537642 MACROD1Q9BQ69 325 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 MESP1Q9BRJ9 268 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 CRB3Q9BUF7 120 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 DRC3Q9H069 523 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 SEMA3GQ9NS98 782 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 ZDHHC18Q9NUE0 388 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 GPR83Q9NYM4 423 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 TXNDC16Q9P2K2 825 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 FBXL4Q9UKA2 621 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 ZNF451Q9Y4E5 1061 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 OARD1Q9Y530 152 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 PCDHGB7Q9Y5F8 929 aa14.06□□□□□ -0.16
USP28-204ENST00000537642 PRPF4O43172 522 aaKnown RBP eCLIP14.05□□□□□ -0.16
USP28-204ENST00000537642 PHGDHO43175 533 aaKnown RBP14.05□□□□□ -0.16
USP28-204ENST00000537642 ALOX12BO75342 701 aa14.05□□□□□ -0.16
USP28-204ENST00000537642 ZIC2O95409 532 aaPredicted RBP14.05□□□□□ -0.16
USP28-204ENST00000537642 CCR8P51685 355 aa14.05□□□□□ -0.16
USP28-204ENST00000537642 CDKL1Q00532 357 aa14.05□□□□□ -0.16
USP28-204ENST00000537642 MEF2AQ02078 507 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms