RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CYP2A13Q16696 494 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 CPTPQ5TA50 214 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 CPZQ66K79 652 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 ANKRD54Q6NXT1 300 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 NXPE4Q6UWF7 544 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 ZNF547Q8IVP9 402 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 ALDH16A1Q8IZ83 802 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 NEIL2Q969S2 332 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 NCLNQ969V3 563 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 COQ8BQ96D53 544 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 DGCR14Q96DF8 476 aaKnown RBP13.1□□□□□ -0.31
SMG6-203ENST00000536871 MRPL38Q96DV4 380 aaKnown RBP13.1□□□□□ -0.31
SMG6-203ENST00000536871 SLC47A1Q96FL8 570 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 VPS50Q96JG6 964 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 MTERF1Q99551 399 aaKnown RBP13.1□□□□□ -0.31
SMG6-203ENST00000536871 DUSP26Q9BV47 211 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 C1QTNF7Q9BXJ2 289 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 REXO4Q9GZR2 422 aaKnown RBP13.1□□□□□ -0.31
SMG6-203ENST00000536871 PIF1Q9H611 641 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 RMI1Q9H9A7 625 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 YBX2Q9Y2T7 364 aaKnown RBP13.1□□□□□ -0.31
SMG6-203ENST00000536871 STON1Q9Y6Q2 735 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 KIF26AQ9ULI4 1882 aaPredicted RBP13.1□□□□□ -0.31
SMG6-203ENST00000536871 FAM149AA5PLN7 773 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 K7ESM1 405 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 ABCB1P08183 1280 aaPredicted RBP13.1□□□□□ -0.31
SMG6-203ENST00000536871 GSTM5P46439 218 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 RXRGP48443 463 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 CDK3Q00526 305 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 ZNF763Q0D2J5 394 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 MESP2Q0VG99 397 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 DDX39BQ13838 428 aaKnown RBP13.1□□□□□ -0.31
SMG6-203ENST00000536871 VEZF1Q14119 521 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 CST6Q15828 149 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 UGT8Q16880 541 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 C9orf50Q5SZB4 431 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 PPP2R2DQ66LE6 453 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 OR4F3Q6IEY1 312 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 IKBIPQ70UQ0 350 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 PATL1Q86TB9 770 aaKnown RBP13.1□□□□□ -0.31
SMG6-203ENST00000536871 LRRC56Q8IYG6 542 aaPredicted RBP13.1□□□□□ -0.31
SMG6-203ENST00000536871 LILRA3Q8N6C8 439 aaPredicted RBP13.1□□□□□ -0.31
SMG6-203ENST00000536871 TSPAN14Q8NG11 270 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 ZDHHC5Q9C0B5 715 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 PELI2Q9HAT8 420 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 ZNF282Q9UDV7 671 aaPredicted RBP13.1□□□□□ -0.31
SMG6-203ENST00000536871 ATP6V1HQ9UI12 483 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 ASF1AQ9Y294 204 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 PCDHB11Q9Y5F2 797 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 ANKRD12Q6UB98 2062 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.09□□□□□ -0.31
SMG6-203ENST00000536871 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.09□□□□□ -0.31
SMG6-203ENST00000536871 PIPSLA2A3N6 862 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 CLIC1O00299 241 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 RNASET2O00584 256 aaKnown RBP13.09□□□□□ -0.31
SMG6-203ENST00000536871 EI24O14681 340 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 ALBP02768 609 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 ERGP11308 486 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 PTX3P26022 381 aaPredicted RBP13.09□□□□□ -0.31
SMG6-203ENST00000536871 GSTT1P30711 240 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 MTHFRP42898 656 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 METAP1P53582 386 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 PLIN5Q00G26 463 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 CTBSQ01459 385 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 DMPKQ09013 629 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 SLBPQ14493 270 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMG6-203ENST00000536871 STARD3Q14849 445 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 AAK1Q2M2I8 961 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 RFX4Q33E94 735 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 CCSMST1Q4G0I0 132 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 PRAMEF14Q5SWL7 426 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 C1QTNF12Q5T7M4 302 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 PRAMEF13Q5VWM6 474 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 ZNF776Q68DI1 518 aaPredicted RBP13.09□□□□□ -0.31
SMG6-203ENST00000536871 CES5AQ6NT32 575 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 IYDQ6PHW0 289 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 ABRAXAS1Q6UWZ7 409 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 DNAJC14Q6Y2X3 702 aaPredicted RBP13.09□□□□□ -0.31
SMG6-203ENST00000536871 C11orf96Q7Z7L8 435 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 HEATR4Q86WZ0 1026 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 ZCCHC7Q8N3Z6 543 aaKnown RBP13.09□□□□□ -0.31
SMG6-203ENST00000536871 C1orf52Q8N6N3 182 aaKnown RBP13.09□□□□□ -0.31
SMG6-203ENST00000536871 TRIML2Q8N7C3 387 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 SNX19Q92543 992 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 AURKBQ96GD4 344 aaPredicted RBP13.09□□□□□ -0.31
SMG6-203ENST00000536871 PYURFQ96I23 114 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 TEX101Q9BY14 249 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 MCOLN1Q9GZU1 580 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 RAD21L1Q9H4I0 556 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 PRM3Q9NNZ6 103 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 DMRT3Q9NQL9 472 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 PHPT1Q9NRX4 125 aaPredicted RBP13.09□□□□□ -0.31
SMG6-203ENST00000536871 DNAAF2Q9NVR5 837 aaKnown RBP13.09□□□□□ -0.31
SMG6-203ENST00000536871 USE1Q9NZ43 259 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 KIAA1549LQ6ZVL6 1849 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 DENND4AQ7Z401 1863 aa13.09□□□□□ -0.31
SMG6-203ENST00000536871 A0A087WXM4 84 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 GNG14A0A1W2PPG7 69 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 GNGT2O14610 69 aa13.08□□□□□ -0.32
SMG6-203ENST00000536871 PCDH7O60245 1069 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms