RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 SYTL2Q9HCH5 934 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 LHX9Q9NQ69 397 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 STARD5Q9NSY2 213 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 GEMIN8Q9NWZ8 242 aaKnown RBP6.78□□□□□ -1.32
YBX3-206ENST00000536823 SIRT5Q9NXA8 310 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 TRMT1Q9NXH9 659 aaKnown RBP6.78□□□□□ -1.32
YBX3-206ENST00000536823 SPHK1Q9NYA1 384 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 KCND3Q9UK17 655 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 PADI1Q9ULC6 663 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 TMA7Q9Y2S6 64 aaKnown RBP6.78□□□□□ -1.32
YBX3-206ENST00000536823 TDRKHQ9Y2W6 561 aaKnown RBP6.78□□□□□ -1.32
YBX3-206ENST00000536823 MRPS18BQ9Y676 258 aaKnown RBP6.78□□□□□ -1.32
YBX3-206ENST00000536823 ANKRD12Q6UB98 2062 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 HECTD1Q9ULT8 2610 aa6.78□□□□□ -1.32
YBX3-206ENST00000536823 HEATR5BQ9P2D3 2071 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 A0A0J9YY10 115 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 FAM237BA0A1B0GVD1 139 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 SDR42E2A6NKP2 422 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 GOLGA8KD6RF30 607 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 H3BMM5 538 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 GOLGA8TH3BQL2 631 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 KPNA5O15131 536 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 PFDN6O15212 129 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 ZNF185O15231 689 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 AVILO75366 819 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 KATNA1O75449 491 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 SCRG1O75711 98 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 NTRK1P04629 796 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 SFTPCP11686 197 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 PLA2G2AP14555 144 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 TCP1P17987 556 aaKnown RBP6.77□□□□□ -1.33
YBX3-206ENST00000536823 CYP2A7P20853 494 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 CD247P20963 164 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 ATP5DP30049 168 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 PEBP1P30086 187 aaKnown RBP6.77□□□□□ -1.33
YBX3-206ENST00000536823 RAB28P51157 221 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 ADARP55265 1226 aaKnown RBP6.77□□□□□ -1.33
YBX3-206ENST00000536823 ITGA1P56199 1179 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 POLE2P56282 527 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 GPS2Q13227 327 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 KCNAB2Q13303 367 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 ZIC1Q15915 447 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 KYNUQ16719 465 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 SLC5A12Q1EHB4 618 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 DEFB109BQ30KR1 87 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 ANKRD20A4Q4UJ75 823 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 ZNF789Q5FWF6 425 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 PLEKHS1Q5SXH7 462 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 ATP1A1-AS1Q5TC04 95 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 ZNF470Q6ECI4 717 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 NEPROQ6NW34 567 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 FAM198BQ6UWH4 519 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 CDHR3Q6ZTQ4 885 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 OTOAQ7RTW8 1153 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 SDCCAG8Q86SQ7 713 aaPredicted RBP6.77□□□□□ -1.33
YBX3-206ENST00000536823 TMEM135Q86UB9 458 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 HOOK3Q86VS8 718 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 NAT8LQ8N9F0 302 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 LINC01555Q8NAE3 123 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 OR1L3Q8NH93 324 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 FLVCR1-AS1Q8TAF5 88 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 GSDMBQ8TAX9 411 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 ANP32BQ92688 251 aaKnown RBP6.77□□□□□ -1.33
YBX3-206ENST00000536823 BIRC8Q96P09 236 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 MENTQ9BUN1 341 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 RAB11FIP5Q9BXF6 653 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 ACTL8Q9H568 366 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 GP6Q9HCN6 339 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 WHRNQ9P202 907 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 TUBD1Q9UJT1 453 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 PLAGL1Q9UM63 463 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 POLHQ9Y253 713 aa6.77□□□□□ -1.33
YBX3-206ENST00000536823 SPTBN1Q01082 2364 aaKnown RBP6.77□□□□□ -1.33
YBX3-206ENST00000536823 USP9XQ93008 2570 aaPredicted RBP6.76□□□□□ -1.33
YBX3-206ENST00000536823 ZCWPW2A0A1B0GU75 182 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 MAGEB16A2A368 324 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 USP27XA6NNY8 438 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 ISM1B1AKI9 464 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 E7EQ34 232 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 GOLGA8MH3BSY2 632 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 RASGRF2O14827 1237 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 NIPSNAP2O75323 286 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 CREG1O75629 220 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 USP1O94782 785 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 PKMP14618 531 aaKnown RBP6.76□□□□□ -1.33
YBX3-206ENST00000536823 PTPN4P29074 926 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 FMO4P31512 558 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 RORAP35398 523 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 CCR10P46092 362 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 BDKRB1P46663 353 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 GABRA4P48169 554 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 CHRNEQ04844 493 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 NFATC3Q12968 1075 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 PTK6Q13882 451 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 DHX34Q14147 1143 aaKnown RBP6.76□□□□□ -1.33
YBX3-206ENST00000536823 GRB7Q14451 532 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 PPP1R7Q15435 360 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 DEFB110Q30KQ9 67 aa6.76□□□□□ -1.33
YBX3-206ENST00000536823 RNASEH2BQ5TBB1 312 aaKnown RBP6.76□□□□□ -1.33
YBX3-206ENST00000536823 PRAMEF17Q5VTA0 474 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms