RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 EBF2Q9HAK2 575 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 LMAN1LQ9HAT1 526 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 PRMT8Q9NR22 394 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-202ENST00000535689 NRBP2Q9NSY0 501 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 ECHDC1Q9NTX5 307 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 TMEM30AQ9NV96 361 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 DPP3Q9NY33 737 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 GDE1Q9NZC3 331 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 BCCIPQ9P287 314 aaKnown RBP eCLIP3.15□□□□□ -1.91
SNHG1-202ENST00000535689 LARSQ9P2J5 1176 aaKnown RBP3.15□□□□□ -1.91
SNHG1-202ENST00000535689 MALT1Q9UDY8 824 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 RALYQ9UKM9 306 aaKnown RBP3.15□□□□□ -1.91
SNHG1-202ENST00000535689 CDH7Q9ULB5 785 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 GINS2Q9Y248 185 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 EXOC6BQ9Y2D4 811 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 CEP192Q8TEP8 1941 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 ATG2BQ96BY7 2078 aa3.15□□□□□ -1.91
SNHG1-202ENST00000535689 HELZ2Q9BYK8 2649 aaKnown RBP3.14□□□□□ -1.91
SNHG1-202ENST00000535689 F5P12259 2224 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 KNTC1P50748 2209 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 ASXL3Q9C0F0 2248 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 LNP1A1A4G5 178 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 ERICH2A1L162 156 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 ASPDHA6ND91 283 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 A8MV72 311 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-202ENST00000535689 MID1O15344 667 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 KCNAB3O43448 404 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 SSX4O60224 188 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 TBCAO75347 108 aaKnown RBP3.14□□□□□ -1.91
SNHG1-202ENST00000535689 ECI2O75521 394 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 NTN1O95631 604 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 ATP1A1P05023 1023 aaKnown RBP3.14□□□□□ -1.91
SNHG1-202ENST00000535689 FYNP06241 537 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 SNRNP70P08621 437 aaKnown RBP3.14□□□□□ -1.91
SNHG1-202ENST00000535689 CCDC192P0DO97 292 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 HOXA9P31269 272 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 KRT20P35900 424 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 DVL1P1P54792 670 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-202ENST00000535689 HSPB3Q12988 150 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 PLA2G7Q13093 441 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 HTR4Q13639 388 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 TAF13Q15543 124 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 DLG2Q15700 870 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 QRICH1Q2TAL8 776 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 MARCH8Q5T0T0 291 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 ARMC4Q5T2S8 1044 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 LIN9Q5TKA1 542 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 WBP2NLQ6ICG8 309 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 KIAA1161Q6NSJ0 714 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 ENOSF1Q7L5Y1 443 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 CCDC186Q7Z3E2 898 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 ITPRIPQ8IWB1 547 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 NAGSQ8N159 534 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 MAB21L3Q8N8X9 362 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 IL17RCQ8NAC3 791 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 HJURPQ8NCD3 748 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-202ENST00000535689 SECTM1Q8WVN6 248 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 FAM3CQ92520 227 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 SLAMF9Q96A28 289 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 ELSPBP1Q96BH3 223 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 SLC22A18Q96BI1 424 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 PTERQ96BW5 349 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 SCRN2Q96FV2 425 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 CNDP2Q96KP4 475 aaKnown RBP3.14□□□□□ -1.91
SNHG1-202ENST00000535689 RAB3IPQ96QF0 476 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-202ENST00000535689 JPH2Q9BR39 696 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-202ENST00000535689 TRMT61BQ9BVS5 477 aaKnown RBP3.14□□□□□ -1.91
SNHG1-202ENST00000535689 CCDC106Q9BWC9 280 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 C1QTNF4Q9BXJ3 329 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 GCOM2Q9BZD3 368 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-202ENST00000535689 KRT23Q9C075 422 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 GLT8D2Q9H1C3 349 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 ARRDC1-AS1Q9H2J1 176 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 EVA1AQ9H8M9 152 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 ERVMER34-1Q9H9K5 563 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 ZFP14Q9HCL3 533 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 HHATLQ9HCP6 504 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 TMEM9BQ9NQ34 198 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 PLSCR4Q9NRQ2 329 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 OCIAD1Q9NX40 245 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 CLIC5Q9NZA1 410 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 TINAGQ9UJW2 476 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 PCDHGB4Q9UN71 923 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 TNFRSF18Q9Y5U5 241 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 ZFHX4Q86UP3 3567 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 CEP295Q9C0D2 2601 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 NFASCO94856 1347 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 CNTNAP2Q9UHC6 1331 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 LAMA4Q16363 1823 aa3.14□□□□□ -1.91
SNHG1-202ENST00000535689 ACACAQ13085 2346 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 GSTTP1A0A1W2PQM5 241 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 ELOVL7A1L3X0 281 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 OR5K3A6NET4 321 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 PRSS47A8MTI9 375 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 MAGEB17A8MXT2 336 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 PRR32B1ATL7 298 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 J3QR06 171 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 SH2B2O14492 632 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-202ENST00000535689 SYNGR3O43761 229 aa3.13□□□□□ -1.91
SNHG1-202ENST00000535689 GPR137BO60478 399 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms