RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 RCN2Q14257 317 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 SLBPQ14493 270 aaKnown RBP eCLIP14.93□□□□□ -0.02
CNN1-202ENST00000535659 ARL13AQ5H913 290 aaPredicted RBP14.93□□□□□ -0.02
CNN1-202ENST00000535659 PAGE2BQ5JRK9 111 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 CES4AQ5XG92 561 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 MYLK4Q86YV6 388 aaPredicted RBP14.93□□□□□ -0.02
CNN1-202ENST00000535659 PLD3Q8IV08 490 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 MCATQ8IVS2 390 aaKnown RBP14.93□□□□□ -0.02
CNN1-202ENST00000535659 LSMEM2Q8N112 164 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 GALNT15Q8N3T1 639 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 TBC1D19Q8N5T2 526 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 ZNF740Q8NDX6 193 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 OR4F6Q8NGB9 312 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 FAM76AQ8TAV0 307 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 RAB3IL1Q8TBN0 382 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 ZNF75CPQ92670 426 aaPredicted RBP14.93□□□□□ -0.02
CNN1-202ENST00000535659 MAGEB10Q96LZ2 347 aaPredicted RBP14.93□□□□□ -0.02
CNN1-202ENST00000535659 ZFYVE21Q9BQ24 234 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 SARGQ9BW04 601 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 NT5DC2Q9H857 520 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 EML4Q9HC35 981 aaKnown RBP14.93□□□□□ -0.02
CNN1-202ENST00000535659 MID1IP1Q9NPA3 183 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 AKAP7Q9P0M2 348 aaPredicted RBP14.93□□□□□ -0.02
CNN1-202ENST00000535659 ZNF225Q9UK10 706 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 ZNF490Q9ULM2 529 aaPredicted RBP14.93□□□□□ -0.02
CNN1-202ENST00000535659 KCNE1BA0A087WTH5 132 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 A0A0J9YVX5 310 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 TRBC2A0A5B9 178 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 CNOT1A5YKK6 2376 aaKnown RBP14.92□□□□□ -0.02
CNN1-202ENST00000535659 TMEM114B3SHH9 223 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 AGRPO00253 132 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 HAT1O14929 419 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 OR1F1O43749 312 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 ESRRBO95718 433 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 FOLR1P15328 257 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 CD22P20273 847 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 MLLT3P42568 568 aaPredicted RBP14.92□□□□□ -0.02
CNN1-202ENST00000535659 SLC1A6P48664 564 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 RPS15AP62244 130 aaKnown RBP14.92□□□□□ -0.02
CNN1-202ENST00000535659 TARDBPQ13148 414 aaKnown RBP eCLIP14.92□□□□□ -0.02
CNN1-202ENST00000535659 KCNAB1Q14722 419 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 RBBP5Q15291 538 aaKnown RBP14.92□□□□□ -0.02
CNN1-202ENST00000535659 ATG16L1Q676U5 607 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 GRHL2Q6ISB3 625 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 TMIGD1Q6UXZ0 262 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 GPRIN3Q6ZVF9 776 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 TMPRSS7Q7RTY8 843 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 SYVN1Q86TM6 617 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 COL27A1Q8IZC6 1860 aaPredicted RBP14.92□□□□□ -0.02
CNN1-202ENST00000535659 CHCHD4Q8N4Q1 142 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 UBE2E3Q969T4 207 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 THAP11Q96EK4 314 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 OR2A5Q96R48 311 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 CMKLR1Q99788 373 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 SPNS1Q9H2V7 528 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 FAM53CQ9NYF3 392 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 PLCL2Q9UPR0 1127 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 WDFY3Q8IZQ1 3526 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 KLF11O14901 512 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 ITM2AO43736 263 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 SRPX2O60687 465 aaPredicted RBP14.92□□□□□ -0.02
CNN1-202ENST00000535659 OR4F21O95013 312 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 CHRNGP07510 517 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 MSL3P1P0C860 447 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 HGFP14210 728 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 ARRB2P32121 409 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 SCTRP47872 440 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 GABRA4P48169 554 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 ABCE1P61221 599 aaKnown RBP14.92□□□□□ -0.02
CNN1-202ENST00000535659 REEP5Q00765 189 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 ACY1Q03154 408 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 BST1Q10588 318 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 CPSF6Q16630 551 aaKnown RBP eCLIP14.92□□□□□ -0.02
CNN1-202ENST00000535659 GGTA1PQ4G0N0 100 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 LETMD1Q6P1Q0 360 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 MED27Q6P2C8 311 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 ATG14Q6ZNE5 492 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 RNF44Q7L0R7 432 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 RAB11FIP2Q7L804 512 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 MFSD9Q8NBP5 474 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 AGAP11Q8TF27 550 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 CKAP2Q8WWK9 683 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 LIN37Q96GY3 246 aaPredicted RBP14.92□□□□□ -0.02
CNN1-202ENST00000535659 FCRL4Q96PJ5 515 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 SHCBP1LQ9BZQ2 653 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 ZNF395Q9H8N7 513 aaPredicted RBP14.92□□□□□ -0.02
CNN1-202ENST00000535659 OCIAD1Q9NX40 245 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 TRPS1Q9UHF7 1281 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 PCDHGA11Q9Y5H2 935 aa14.92□□□□□ -0.02
CNN1-202ENST00000535659 EFCAB7A8K855 629 aa14.91□□□□□ -0.02
CNN1-202ENST00000535659 H0YIV9 168 aa14.91□□□□□ -0.02
CNN1-202ENST00000535659 HCRTR1O43613 425 aa14.91□□□□□ -0.02
CNN1-202ENST00000535659 SNUPNO95149 360 aaKnown RBP14.91□□□□□ -0.02
CNN1-202ENST00000535659 HSPA4LO95757 839 aa14.91□□□□□ -0.02
CNN1-202ENST00000535659 FGF4P08620 206 aa14.91□□□□□ -0.02
CNN1-202ENST00000535659 BCL6P41182 706 aa14.91□□□□□ -0.02
CNN1-202ENST00000535659 EIF3IQ13347 325 aaKnown RBP14.91□□□□□ -0.02
CNN1-202ENST00000535659 ZRSR2Q15696 482 aaKnown RBP14.91□□□□□ -0.02
CNN1-202ENST00000535659 FRMPD2BQ6IN97 320 aa14.91□□□□□ -0.02
CNN1-202ENST00000535659 CUZD1Q86UP6 607 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms