RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 BMP1P13497 986 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 CLCN7P51798 805 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 COL9A2Q14055 689 aaPredicted RBP15.4■□□□□ 0.06
MCF2L-232ENST00000535094 TBRG1Q3YBR2 411 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 PYDC2Q56P42 97 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 CERS6Q6ZMG9 384 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 TSPAN33Q86UF1 283 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 ISG20Q96AZ6 181 aaKnown RBP15.4■□□□□ 0.06
MCF2L-232ENST00000535094 SLIRPQ9GZT3 109 aaKnown RBP15.4■□□□□ 0.06
MCF2L-232ENST00000535094 CLMPQ9H6B4 373 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 PCDHGB3Q9Y5G1 929 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 TRIM64A6NGJ6 449 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 SLC16A6O15403 523 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 ARHGEF9O43307 516 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 PTHP01270 115 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 EBLN1P0CF75 366 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 CASP3P42574 277 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 ENKURQ8TC29 256 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 PEX13Q92968 403 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 CPPED1Q9BRF8 314 aaPredicted RBP15.4■□□□□ 0.06
MCF2L-232ENST00000535094 DUSP26Q9BV47 211 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 MMP28Q9H239 520 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 CPNE5Q9HCH3 593 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 DNAJC27Q9NZQ0 273 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 NOX1Q9Y5S8 564 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 PRRG1O14668 218 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 GUCY1B2O75343 617 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 TNFRSF21O75509 655 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 ASGR1P07306 291 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 ZNF865P0CJ78 1059 aaPredicted RBP15.4■□□□□ 0.06
MCF2L-232ENST00000535094 PRPS2P11908 318 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 EPORP19235 508 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 TNNI3P19429 210 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 ATP6V1E1P36543 226 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 NDUFA5Q16718 116 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 SYT6Q5T7P8 510 aaPredicted RBP15.4■□□□□ 0.06
MCF2L-232ENST00000535094 FRG2Q64ET8 278 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 ZNF517Q6ZMY9 492 aaPredicted RBP15.4■□□□□ 0.06
MCF2L-232ENST00000535094 LMNTD1Q8N9Z9 388 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 NECTIN4Q96NY8 510 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 FRG2BQ96QU4 278 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 CDK5RAP1Q96SZ6 601 aaKnown RBP15.4■□□□□ 0.06
MCF2L-232ENST00000535094 SLC32A1Q9H598 525 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 FNIP2Q9P278 1114 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 DNAJB5O75953 348 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 WISP3O95389 354 aaPredicted RBP15.39■□□□□ 0.05
MCF2L-232ENST00000535094 CA5AP35218 305 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 CLDN8P56748 225 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 ACVR1Q04771 509 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 NFATC2Q13469 925 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 DUOXA1Q1HG43 343 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 LRIT3Q3SXY7 679 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 NRARPQ7Z6K4 114 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 ENTHD1Q8IYW4 607 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 C1orf52Q8N6N3 182 aaKnown RBP15.39■□□□□ 0.05
MCF2L-232ENST00000535094 BEND7Q8N7W2 519 aaPredicted RBP15.39■□□□□ 0.05
MCF2L-232ENST00000535094 DIRAS2Q96HU8 199 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 DUSP21Q9H596 190 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 SIRT5Q9NXA8 310 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 A0A1B0GVM2 712 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 CCDC182A6NF36 153 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 M0QZQ0 153 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 ZNF197O14709 1029 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 WNT9AO14904 365 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 CPNE3O75131 537 aaKnown RBP15.39■□□□□ 0.05
MCF2L-232ENST00000535094 KCNK2O95069 426 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 SERPIND1P05546 499 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 CKMP06732 381 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 TSPAN19P0C672 248 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 HOXD8P13378 290 aaPredicted RBP15.39■□□□□ 0.05
MCF2L-232ENST00000535094 ACPPP15309 386 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 WEE1P30291 646 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 CRISP3P54108 245 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 TUBA1BP68363 451 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 NKX3-2P78367 333 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 PROX2Q3B8N5 592 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 SPDYE7PQ495Y7 208 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 C10orf62Q5T681 223 aaPredicted RBP15.39■□□□□ 0.05
MCF2L-232ENST00000535094 TUBA1AQ71U36 451 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 ZZZ3Q8IYH5 903 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 FAM9CQ8IZT9 166 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 C11orf65Q8NCR3 313 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 ST13P5Q8NFI4 369 aaPredicted RBP15.39■□□□□ 0.05
MCF2L-232ENST00000535094 PJA1Q8NG27 643 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 PHOX2BQ99453 314 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 MGLLQ99685 303 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 SLC30A2Q9BRI3 323 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 ACAT2Q9BWD1 397 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 CLN6Q9NWW5 311 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 IL17CQ9P0M4 197 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 AP3D1O14617 1153 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 KDELR3O43731 214 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 OR10H3O60404 316 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 SSTR4P31391 388 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 MTA1Q13330 715 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 SNX20Q7Z614 316 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 CCDC115Q96NT0 180 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 ZDHHC6Q9H6R6 413 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 SGK2Q9HBY8 427 aa15.39■□□□□ 0.05
MCF2L-232ENST00000535094 TMCC3Q9ULS5 477 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms