RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	ADIPOQ	Q15848	244 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	NTRK2	Q16620	822 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PLEKHA7	Q6IQ23	1121 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SLC8B1	Q6J4K2	584 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	DUS1L	Q6P1R4	473 aa	Known RBP	4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MEX3B	Q6ZN04	569 aa	Known RBP	4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	YTHDF3	Q7Z739	585 aa	Known RBP	4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	DSG4	Q86SJ6	1040 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ADGRG3	Q86Y34	549 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	KRTAP1-3	Q8IUG1	177 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CNGA4	Q8IV77	575 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SLC16A11	Q8NCK7	471 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ST6GALNAC3	Q8NDV1	305 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	BEST2	Q8NFU1	509 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	OR4C6	Q8NH72	309 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	DDB2	Q92466	427 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	BIRC7	Q96CA5	298 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ZMYND19	Q96E35	227 aa	Predicted RBP	4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	RADIL	Q96JH8	1075 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	APOLD1	Q96LR9	279 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	FIZ1	Q96SL8	496 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ACOX2	Q99424	681 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SEPT5	Q99719	369 aa	Predicted RBP	4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	DDX50	Q9BQ39	737 aa	Known RBP	4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TMEM47	Q9BQJ4	181 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	NUP58	Q9BVL2	599 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PRSS22	Q9GZN4	317 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SYNDIG1	Q9H7V2	258 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CYSLTR2	Q9NS75	346 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PCDHA12	Q9UN75	941 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	YIPF1	Q9Y548	306 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MAU2	Q9Y6X3	613 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	FAM169A	Q9Y6X4	670 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442		U3KQA8	63 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PLXNA2	O75051	1894 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442		A0A1W2PR77	199 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	C1orf226	A1L170	272 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CASTOR2	A6NHX0	329 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MYMK	A6NI61	221 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	GLOD5	A6NK44	160 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442		H7C0S8	307 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MASP2	O00187	686 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MDM4	O15151	490 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	STBD1	O95210	358 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	FTCD	O95954	541 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SRPRA	P08240	638 aa	Known RBP	4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CBSL	P0DN79	551 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TMEM11	P17152	192 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CHRNB2	P17787	502 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SAT1	P21673	171 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CD82	P27701	267 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CBS	P35520	551 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PPP5C	P53041	499 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SELENOV	P59797	346 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	POU5F1	Q01860	360 aa	Known RBP	4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ACSM2A	Q08AH3	577 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CDC16	Q13042	620 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ITGAD	Q13349	1161 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	NAB2	Q15742	525 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CDC37	Q16543	378 aa	Predicted RBP	4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PCGF3	Q3KNV8	242 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	KRTAP15-1	Q3LI76	137 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CCDC184	Q52MB2	194 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ACSM2B	Q68CK6	577 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TPGS2	Q68CL5	300 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SLC2A7	Q6PXP3	512 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	C12orf54	Q6X4T0	127 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SLC16A12	Q6ZSM3	486 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PLPPR4	Q7Z2D5	763 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CACUL1	Q86Y37	369 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CAMK1D	Q8IU85	385 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SLC25A45	Q8N413	288 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	BICD2	Q8TD16	824 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PRPF31	Q8WWY3	499 aa	Known RBP	4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	INPP5D	Q92835	1189 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ERGIC1	Q969X5	290 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ZMAT2	Q96NC0	199 aa	Known RBP	4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ZNF570	Q96NI8	536 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	GCNA	Q96QF7	691 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	BAG1	Q99933	345 aa	Predicted RBP	4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	POLDIP3	Q9BY77	421 aa	Known RBP	4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	LINC00597	Q9H2U6	94 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	NDST4	Q9H3R1	872 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ESRP2	Q9H6T0	727 aa	Known RBP	4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PAG1	Q9NWQ8	432 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ABCA13	Q86UQ4	5058 aa		4.35	□□□□□ -1.71
ECHDC1-223	ENST00000534442	NUMA1	Q14980	2115 aa		4.34	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MYO7B	Q6PIF6	2116 aa		4.34	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TMEM202	A6NGA9	273 aa		4.34	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TSPY2	A6NKD2	308 aa		4.34	□□□□□ -1.71
ECHDC1-223	ENST00000534442	KCNU1	A8MYU2	1149 aa		4.34	□□□□□ -1.71
ECHDC1-223	ENST00000534442	NMT2	O60551	498 aa		4.34	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MITF	O75030	526 aa	Predicted RBP	4.34	□□□□□ -1.71
ECHDC1-223	ENST00000534442	LRCH4	O75427	683 aa		4.34	□□□□□ -1.71
ECHDC1-223	ENST00000534442	FGF19	O95750	216 aa		4.34	□□□□□ -1.71
ECHDC1-223	ENST00000534442	STS	P08842	583 aa		4.34	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PDHB	P11177	359 aa		4.34	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ACADL	P28330	430 aa		4.34	□□□□□ -1.71
ECHDC1-223	ENST00000534442	HNRNPH3	P31942	346 aa	Known RBP	4.34	□□□□□ -1.71

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