RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 TMEM145Q8NBT3 493 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 ZNF548Q8NEK5 533 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-236ENST00000533667 PIGKQ92643 395 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 MOAP1Q96BY2 351 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 TSGA13Q96PP4 275 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 PKP2Q99959 881 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 WDR26Q9H7D7 661 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 VRTNQ9H8Y1 702 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 HCN3Q9P1Z3 774 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 TMEM98Q9Y2Y6 226 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 IFT172Q9UG01 1749 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 A0A0U1RQF3 1178 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 ANKRD33BA6NCL7 494 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 TYROBPO43914 113 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 INMTO95050 263 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 HPRP00739 348 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 PSKH1P11801 424 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 ALAS2P22557 587 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 APLP1P51693 650 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 HMGCS1Q01581 520 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 ADAM15Q13444 863 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 SSX2Q16385 188 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 PRPF38BQ5VTL8 546 aaKnown RBP6.82□□□□□ -1.32
CTNND1-236ENST00000533667 MEDAGQ5VYS4 303 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 KIAA1614Q5VZ46 1190 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 SMARCD3Q6STE5 483 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 TMCO2Q7Z6W1 182 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-236ENST00000533667 SYVN1Q86TM6 617 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 LRRTM4Q86VH4 590 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 NXPE1Q8N323 547 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 OR2L5Q8NG80 312 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 OR4F6Q8NGB9 312 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 OR8J3Q8NGG0 315 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 CEP76Q8TAP6 659 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 ZCCHC10Q8TBK6 192 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 HDAC2Q92769 488 aaKnown RBP6.82□□□□□ -1.32
CTNND1-236ENST00000533667 BIRC7Q96CA5 298 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 MED30Q96HR3 178 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 GFM1Q96RP9 751 aaKnown RBP6.82□□□□□ -1.32
CTNND1-236ENST00000533667 SLC38A3Q99624 504 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 BTBD1Q9H0C5 482 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 DPAGT1Q9H3H5 408 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 NLE1Q9NVX2 485 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-236ENST00000533667 ELOVL2Q9NXB9 296 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 MGAT4BQ9UQ53 548 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 MED1Q15648 1581 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-236ENST00000533667 PRSS51A0A1B0GVH4 220 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 ENPP3O14638 875 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 DCLK1O15075 740 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 ELNP15502 786 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 ECHS1P30084 290 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 CCKBRP32239 447 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 GRIK2Q13002 908 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 LRRC32Q14392 662 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 OR4F3Q6IEY1 312 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 ZNF783Q6ZMS7 281 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 RBM23Q86U06 439 aaKnown RBP6.82□□□□□ -1.32
CTNND1-236ENST00000533667 THOC6Q86W42 341 aaKnown RBP6.82□□□□□ -1.32
CTNND1-236ENST00000533667 TOMM5Q8N4H5 51 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 C1orf52Q8N6N3 182 aaKnown RBP6.82□□□□□ -1.32
CTNND1-236ENST00000533667 OR5T3Q8NGG3 340 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 SEC14L1Q92503 715 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 SLC45A3Q96JT2 553 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 C1orf74Q96LT6 269 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 ZFP3Q96NJ6 502 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 HIST1H2AAQ96QV6 131 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 TWNKQ96RR1 684 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 PTPN18Q99952 460 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 NDC1Q9BTX1 674 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 C11orf84Q9BUA3 381 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-236ENST00000533667 SPATA9Q9BWV2 254 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 RPF2Q9H7B2 306 aaKnown RBP6.82□□□□□ -1.32
CTNND1-236ENST00000533667 SLC28A3Q9HAS3 691 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 LYARQ9NX58 379 aaKnown RBP6.82□□□□□ -1.32
CTNND1-236ENST00000533667 MAP10Q9P2G4 905 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 RBPJLQ9UBG7 517 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 RIMKLBQ9ULI2 386 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 YIPF1Q9Y548 306 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 LMO7Q8WWI1 1683 aa6.82□□□□□ -1.32
CTNND1-236ENST00000533667 PARP4Q9UKK3 1724 aaKnown RBP6.82□□□□□ -1.32
CTNND1-236ENST00000533667 SNED1Q8TER0 1413 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 OR51F1A6NGY5 319 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 KMOO15229 486 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 PRAMEF11O60813 436 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 ALPPL2P10696 532 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 MAPK3P27361 379 aaPredicted RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 TMBIM6P55061 237 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 NRG3P56975 720 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 RPS24P62847 133 aaKnown RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 CSTF1Q05048 431 aaKnown RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 ZNF234Q14588 700 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 ZNF404Q494X3 552 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 COLEC12Q5KU26 742 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 ZNF678Q5SXM1 525 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 EMC10Q5UCC4 262 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 TXNRD3NBQ6F5E7 133 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 POMZP3Q6PJE2 187 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 LYSMD3Q7Z3D4 306 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 CPNE8Q86YQ8 564 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms