RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 EPORP19235 508 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 VARSP26640 1264 aaKnown RBP10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 GABRA4P48169 554 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 ITGA1P56199 1179 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 VSX2P58304 361 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 DNAJB13P59910 316 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 ERVPABLB-1P60509 514 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 ARF3P61204 181 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 MAGOHP61326 146 aaKnown RBP10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 NAA20P61599 178 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 CYP4F3Q08477 520 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 ASPHQ12797 758 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 CHIT1Q13231 466 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 DOC2AQ14183 400 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 RBBP5Q15291 538 aaKnown RBP10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 TBCCQ15814 346 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 HIST2H2ACQ16777 129 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 PAGE2BQ5JRK9 111 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 WASHC2DQ5SRD0 308 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZNF678Q5SXM1 525 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 HIST2H2AA3Q6FI13 130 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 FRMPD2BQ6IN97 320 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 RNF44Q7L0R7 432 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 GOLGA7Q7Z5G4 137 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 TMEM126BQ8IUX1 230 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 PLD3Q8IV08 490 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 OR1L3Q8NH93 324 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 SREK1Q8WXA9 508 aaKnown RBP10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 PTCD3Q96EY7 689 aaKnown RBP10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZNF578Q96N58 590 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 OR2A5Q96R48 311 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 SARGQ9BW04 601 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 C1QTNF3Q9BXJ4 246 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 SLC7A5P2Q9GIP4 190 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 PITHD1Q9GZP4 211 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 SPRTNQ9H040 489 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 NOL11Q9H8H0 719 aaKnown RBP10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 ACTR8Q9H981 624 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 OXSMQ9NWU1 459 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 SLC17A7Q9P2U7 560 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 AP1M2Q9Y6Q5 423 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 LOC105369274A0A096LPK9 316 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 LOC102723532A0A0G2JNH3 316 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 CDRT15L2A8MXV6 281 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 POLR3GO15318 223 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 HCRTR1O43613 425 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 LCMT2O60294 686 aaKnown RBP10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 NRP2O60462 931 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 TRIM13O60858 407 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 SCRG1O75711 98 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 WFS1O76024 890 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 RPS17P08708 135 aaKnown RBP10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 HBQ1P09105 142 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 CD82P27701 267 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 SLC5A2P31639 672 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 ARL1P40616 181 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 CASP2P42575 452 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 NAGLUP54802 743 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 CDH13P55290 713 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 FOXK2Q01167 660 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 MEF2AQ02078 507 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 CLCQ05315 142 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 PCDH1Q08174 1060 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 SLBPQ14493 270 aaKnown RBP eCLIP10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 GRM7Q14831 915 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 TERF2Q15554 542 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 FAM214AQ32MH5 1076 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 UNC50Q53HI1 259 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 CFAP157Q5JU67 520 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 LIPMQ5VYY2 423 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 LIPJQ5W064 366 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 PWWP2BQ6NUJ5 590 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 TMIGD1Q6UXZ0 262 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 MYLK4Q86YV6 388 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 C10orf107Q8IVU9 208 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 OR4N4Q8N0Y3 316 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 ARFGAP2Q8N6H7 521 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 CCNYL1Q8N7R7 359 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 MFSD9Q8NBP5 474 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 FAM76AQ8TAV0 307 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZNF483Q8TF39 744 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 UBE2E3Q969T4 207 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 ARL8AQ96BM9 186 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 TLCD1Q96CP7 247 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 L3HYPDHQ96EM0 354 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 WDR34Q96EX3 536 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 ATP6V1G3Q96LB4 118 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 TMEM237Q96Q45 408 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 SH3GL2Q99962 352 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 NDC1Q9BTX1 674 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 EFCAB11Q9BUY7 163 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 NLNQ9BYT8 704 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 NT5DC2Q9H857 520 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 SEMA4BQ9NPR2 832 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 ASCL3Q9NQ33 180 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 GEMIN8Q9NWZ8 242 aaKnown RBP10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 PCTPQ9UKL6 214 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 PCDHGA4Q9Y5G9 962 aa10.75□□□□□ -0.69
TRAPPC4-211ENST00000533012 ANKDD1BA6NHY2 528 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms