RNA–Protein interactions for RNA: ENST00000532652.1

AP004550.1-201, humanhuman

TSL 3 BASIC

Gene AP004550.1, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004550.1-201ENST00000532652 MRPS30Q9NP92 439 aaKnown RBP11.91□□□□□ -0.5
AP004550.1-201ENST00000532652 NPDC1Q9NQX5 325 aaPredicted RBP11.91□□□□□ -0.5
AP004550.1-201ENST00000532652 C19orf25Q9UFG5 118 aaPredicted RBP11.91□□□□□ -0.5
AP004550.1-201ENST00000532652 EFR3BQ9Y2G0 817 aa11.91□□□□□ -0.5
AP004550.1-201ENST00000532652 R3HDM2Q9Y2K5 976 aaKnown RBP11.91□□□□□ -0.5
AP004550.1-201ENST00000532652 IGKV1-8A0A0C4DH67 115 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 A0A1B0GTL3 188 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 NKX2-6A6NCS4 301 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 GABRR3A8MPY1 467 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 GOLGA6L19H0YKK7 550 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 P2RX6O15547 441 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 PHF2O75151 1096 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 NEURL1O76050 574 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 SP1P08047 785 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 ZNF24P17028 368 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 SNRPNP63162 240 aaKnown RBP11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 OC90Q02509 493 aaPredicted RBP11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 TRIM14Q14142 442 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 MINDY4Q4G0A6 757 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 FASTKD1Q53R41 847 aaKnown RBP11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 RNFT1Q5M7Z0 435 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 TSTD2Q5T7W7 516 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 SLC25A25Q6KCM7 469 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 C11orf63Q6NUN7 778 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 AADACL2Q6P093 401 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 SUSD1Q6UWL2 747 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 CEP128Q6ZU80 1094 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 SHISA5Q8N114 240 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 MARVELD2Q8N4S9 558 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 RERGQ96A58 199 aaPredicted RBP11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 ZNF778Q96MU6 729 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 OR2A5Q96R48 311 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 ZNF559Q9BR84 538 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 SPATA7Q9P0W8 599 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 MRFAP1Q9Y605 127 aa11.9□□□□□ -0.5
AP004550.1-201ENST00000532652 COL6A5A8TX70 2615 aa11.9□□□□□ -0.51
AP004550.1-201ENST00000532652 OR2W5A6NFC9 320 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 FAM90A27PA6NNH2 459 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 PRMT5O14744 637 aaPredicted RBP11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 PSMD3O43242 534 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 SUN1O94901 812 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 KLK2P20151 261 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 PTGER1P34995 402 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 CTNNA1P35221 906 aaKnown RBP11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 PTPN7P35236 360 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 PPARGP37231 505 aaPredicted RBP11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 CCNFP41002 786 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 AVPR1BP47901 424 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 PRAMEP78395 509 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 TFF3Q07654 80 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 TSTA3Q13630 321 aaPredicted RBP11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 FAM53BQ14153 422 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 MAPKAPK3Q16644 382 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 P3H1Q32P28 736 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 PTRHD1Q6GMV3 140 aaKnown RBP11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 ANKRD37Q7Z713 158 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 CPSF7Q8N684 471 aaKnown RBP11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 FAM71DQ8N9W8 422 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 M1APQ8TC57 530 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 MAGEC3Q8TD91 643 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 FOPNLQ96NB1 174 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 PANX3Q96QZ0 392 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 FOXC2Q99958 501 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 UCK2Q9BZX2 261 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 CXXC4Q9H2H0 198 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 LRFN1Q9P244 771 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 RIMKLBQ9ULI2 386 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 TFR2Q9UP52 801 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 RNF6Q9Y252 685 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 PCDHA3Q9Y5H8 950 aa11.89□□□□□ -0.51
AP004550.1-201ENST00000532652 KIAA1549Q9HCM3 1950 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 MED12Q93074 2177 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 SOWAHDA6NJG2 315 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 H0YIG0 161 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 TXNDC9O14530 226 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 MFAP3LO75121 409 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 ZNF189O75820 626 aaPredicted RBP11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 FAM155BO75949 473 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 TJP3O95049 919 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 TPM3P06753 285 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 TPOP07202 933 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 CYC1P08574 325 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 ERGP11308 486 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 DRD2P14416 443 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 PKMP14618 531 aaKnown RBP11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 MSX1P28360 303 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 RPA3P35244 121 aaPredicted RBP11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 MAGEA1P43355 309 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 GDF10P55107 478 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 ACVR1Q04771 509 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 CDH17Q12864 832 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 EXT1Q16394 746 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 ZNF468Q5VIY5 522 aaPredicted RBP11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 CES4AQ5XG92 561 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 ZNF425Q6IV72 752 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 OTOAQ7RTW8 1153 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 LINC00523Q86TU6 105 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 CD163Q86VB7 1156 aa11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 DMRTC2Q8IXT2 367 aaPredicted RBP11.88□□□□□ -0.51
AP004550.1-201ENST00000532652 HORMAD2Q8N7B1 307 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms