RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 LCTLQ6UWM7 567 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 CAPN12Q6ZSI9 719 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 ZC3HC1Q86WB0 502 aaKnown RBP16.4■□□□□ 0.22
PHRF1-204ENST00000532550 PRSS58Q8IYP2 241 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 NKAPQ8N5F7 415 aaKnown RBP16.4■□□□□ 0.22
PHRF1-204ENST00000532550 ATL1Q8WXF7 558 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 THAP11Q96EK4 314 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 HAUS8Q9BT25 410 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 MFRPQ9BY79 579 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 DRC3Q9H069 523 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 SYNPO2LQ9H987 977 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 SAYSD1Q9NPB0 183 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 TRPC4Q9UBN4 977 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 FBXL4Q9UKA2 621 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 UTP11Q9Y3A2 253 aaKnown RBP16.4■□□□□ 0.22
PHRF1-204ENST00000532550 PSAT1Q9Y617 370 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 HS3ST3B1Q9Y662 390 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 CNTRLQ7Z7A1 2325 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 FAM95CA0A1B0GW59 222 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 MASP2O00187 686 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 EIF3HO15372 352 aaKnown RBP eCLIP16.39■□□□□ 0.219e-8■■□□□ 13.1
PHRF1-204ENST00000532550 IPO13O94829 963 aaKnown RBP16.39■□□□□ 0.21
PHRF1-204ENST00000532550 GUCA1CO95843 209 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 ENO2P09104 434 aaPredicted RBP16.39■□□□□ 0.21
PHRF1-204ENST00000532550 NPPBP16860 134 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 ITGA3P26006 1051 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 AVPR1BP47901 424 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 CSNK1G2P78368 415 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 ILF2Q12905 390 aaKnown RBP16.39■□□□□ 0.21
PHRF1-204ENST00000532550 DSG2Q14126 1118 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 FAM53BQ14153 422 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 TUBB8Q3ZCM7 444 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 IRAK1BP1Q5VVH5 260 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 JMJD6Q6NYC1 403 aaPredicted RBP16.39■□□□□ 0.21
PHRF1-204ENST00000532550 KIRREL2Q6UWL6 708 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 ATCAYQ86WG3 371 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 EFCAB3Q8N7B9 438 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 CDKL2Q92772 493 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 VPS39Q96JC1 886 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 SGPP1Q9BX95 441 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 ZNF552Q9H707 407 aaPredicted RBP16.39■□□□□ 0.21
PHRF1-204ENST00000532550 SLAMF7Q9NQ25 335 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 C3orf18Q9UK00 162 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 PLAAQ9Y263 795 aa16.39■□□□□ 0.21
PHRF1-204ENST00000532550 DOCK10Q96BY6 2186 aa16.38■□□□□ 0.21
PHRF1-204ENST00000532550 IGLV3-12A0A075B6K2 115 aa16.38■□□□□ 0.21
PHRF1-204ENST00000532550 A0A0A6YYC8 382 aaPredicted RBP16.38■□□□□ 0.21
PHRF1-204ENST00000532550 I3L1I5 382 aaPredicted RBP16.38■□□□□ 0.21
PHRF1-204ENST00000532550 P2RX6O15547 441 aa16.38■□□□□ 0.21
PHRF1-204ENST00000532550 SSTR1P30872 391 aa16.38■□□□□ 0.21
PHRF1-204ENST00000532550 SLC26A3P40879 764 aa16.38■□□□□ 0.21
PHRF1-204ENST00000532550 EMP2P54851 167 aa16.38■□□□□ 0.21
PHRF1-204ENST00000532550 SLC12A2P55011 1212 aa16.38■□□□□ 0.21
PHRF1-204ENST00000532550 TMEM207Q6UWW9 146 aa16.38■□□□□ 0.21
PHRF1-204ENST00000532550 PARP9Q8IXQ6 854 aa16.38■□□□□ 0.21
PHRF1-204ENST00000532550 RBMXL3Q8N7X1 1067 aaKnown RBP16.38■□□□□ 0.21
PHRF1-204ENST00000532550 CPT1CQ8TCG5 803 aa16.38■□□□□ 0.21
PHRF1-204ENST00000532550 TM9SF4Q92544 642 aa16.38■□□□□ 0.21
PHRF1-204ENST00000532550 MIB2Q96AX9 1013 aa16.38■□□□□ 0.21
PHRF1-204ENST00000532550 PYCR2Q96C36 320 aa16.38■□□□□ 0.21
PHRF1-204ENST00000532550 FBXL8Q96CD0 374 aa16.38■□□□□ 0.21
PHRF1-204ENST00000532550 FAM129AQ9BZQ8 928 aa16.38■□□□□ 0.21
PHRF1-204ENST00000532550 RAB17Q9H0T7 212 aa16.38■□□□□ 0.21
PHRF1-204ENST00000532550 MKKSQ9NPJ1 570 aaPredicted RBP16.38■□□□□ 0.21
PHRF1-204ENST00000532550 TXNDC16Q9P2K2 825 aa16.38■□□□□ 0.21
PHRF1-204ENST00000532550 NOVA2Q9UNW9 492 aaKnown RBP16.38■□□□□ 0.21
PHRF1-204ENST00000532550 MAP4K5Q9Y4K4 846 aa16.38■□□□□ 0.21
PHRF1-204ENST00000532550 SCN3AQ9NY46 2000 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 FEZF1A0PJY2 475 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 FOXS1O43638 330 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 STATHP02808 62 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 HEXBP07686 556 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 CDH1P12830 882 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 ZNF37AP17032 561 aaPredicted RBP16.37■□□□□ 0.21
PHRF1-204ENST00000532550 CXCR2P25025 360 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 CCR8P51685 355 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 PLTPP55058 493 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 TAS2R39P59534 338 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 CAV1Q03135 178 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 C3orf62Q6ZUJ4 267 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 LAPTM4BQ86VI4 370 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 ZADH2Q8N4Q0 377 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 ARHGEF39Q8N4T4 335 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 CAMKVQ8NCB2 501 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 OR11G2Q8NGC1 345 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 OR56A3Q8NH54 315 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 SLC13A3Q8WWT9 602 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 ANKRD7Q92527 254 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 PNPLA2Q96AD5 504 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 RHOJQ9H4E5 214 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 GPAMQ9HCL2 828 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 C14orf105Q9NVL8 296 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 SH2B3Q9UQQ2 575 aa16.37■□□□□ 0.21
PHRF1-204ENST00000532550 NUP210LQ5VU65 1888 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 MAP2K7O14733 419 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 FFAR3O14843 346 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 GPR42O15529 346 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 LCMT2O60294 686 aaKnown RBP16.36■□□□□ 0.21
PHRF1-204ENST00000532550 ALOX12BO75342 701 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 VPS4BO75351 444 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms