RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 LAS2Q8IYD9 372 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 CARFQ8N187 725 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 KRT78Q8N1N4 520 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 FAR2Q96K12 515 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 TRAPPC9Q96Q05 1148 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 SARGQ9BW04 601 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 EPN3Q9H201 632 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 NT5DC2Q9H857 520 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 TMEM9Q9P0T7 183 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 SEMA5BQ9P283 1151 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 ATXN7L1Q9ULK2 861 aaPredicted RBP17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 ZNF490Q9ULM2 529 aaPredicted RBP17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 FIS1Q9Y3D6 152 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 PCDHGA11Q9Y5H2 935 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 DNAJC15Q9Y5T4 150 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 CACNA1AO00555 2505 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 TRBC2A0A5B9 178 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 SLCO1B7G3V0H7 640 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 NTN3O00634 580 aaPredicted RBP17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 HAT1O14929 419 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 ST6GAL1P15907 406 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 DRD4P21917 467 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 RELAQ04206 551 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 PUM1Q14671 1186 aaKnown RBP eCLIP17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 HIST2H2ACQ16777 129 aaPredicted RBP17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 TCHHL1Q5QJ38 904 aaPredicted RBP17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 HIST2H2AA3Q6FI13 130 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 CGB2Q6NT52 195 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 MED27Q6P2C8 311 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 TMEM71Q6P5X7 295 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 TMIGD1Q6UXZ0 262 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 TMPRSS9Q7Z410 1059 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 HOMEZQ8IX15 550 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 AFAP1L2Q8N4X5 818 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 OR7G3Q8NG95 312 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 WDR20Q8TBZ3 569 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 DPYSL5Q9BPU6 564 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 KLHL25Q9H0H3 589 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 DLL3Q9NYJ7 618 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 PDP2Q9P2J9 529 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 SNX6Q9UNH7 406 aa17.24■□□□□ 0.35
PPP1CA-208ENST00000532446 IGHV5-51A0A0C4DH38 117 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 FEZF1A0PJY2 475 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 SLC9B1P1A6NJY1 282 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 MANBAO00462 879 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 ZNF195O14628 629 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 HDAC3O15379 428 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 KRT6AP02538 564 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 KRT6BP04259 564 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 GRK3P35626 688 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 KRT6CP48668 564 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 HTR6P50406 440 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 ZIC1Q15915 447 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 FRG2Q64ET8 278 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 ZNF574Q6ZN55 896 aaPredicted RBP17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 RNF165Q6ZSG1 346 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 WDR75Q8IWA0 830 aaKnown RBP17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 C19orf47Q8N9M1 422 aaKnown RBP17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 OR4D9Q8NGE8 314 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 TWIST2Q8WVJ9 160 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 USP7Q93009 1102 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 UBE2E3Q969T4 207 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 FRG2BQ96QU4 278 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 ZMYND15Q9H091 742 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 TUBB1Q9H4B7 451 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 VTI1BQ9UEU0 232 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 TSC22D4Q9Y3Q8 395 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 USH1CQ9Y6N9 552 aa17.23■□□□□ 0.35
PPP1CA-208ENST00000532446 LCMT2O60294 686 aaKnown RBP17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 PRAMEF10O60809 474 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 CTSVO60911 334 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 CHEK2O96017 543 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 EZRP15311 586 aaKnown RBP17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 ALOX15P16050 662 aaPredicted RBP17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 SDHBP21912 280 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 SCTRP47872 440 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 BTKQ06187 659 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 IFT88Q13099 833 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 RBBP5Q15291 538 aaKnown RBP17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 RSPO4Q2I0M5 234 aaPredicted RBP17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 CACHD1Q5VU97 1274 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 FBXO42Q6P3S6 717 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 MAVSQ7Z434 540 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 PRSS42Q7Z5A4 293 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 GLRX5Q86SX6 157 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 PLD3Q8IV08 490 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 ANKRD53Q8N9V6 530 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 REPS1Q96D71 796 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 GFM1Q96RP9 751 aaKnown RBP17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 TRIM55Q9BYV6 548 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 CHRNA10Q9GZZ6 450 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 NSRP1Q9H0G5 558 aaKnown RBP17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 RHBGQ9H310 441 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 ELOVL6Q9H5J4 265 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 NPHS2Q9NP85 383 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 FARSBQ9NSD9 589 aaKnown RBP17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 KLHL3Q9UH77 587 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 PILRAQ9UKJ1 303 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 SPEGQ15772 3267 aa17.22■□□□□ 0.35
PPP1CA-208ENST00000532446 COL27A1Q8IZC6 1860 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms