RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 BTRCQ9Y297 605 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 GVINP1Q7Z2Y8 2422 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 ZFHX2Q9C0A1 2572 aaPredicted RBP12.02□□□□□ -0.49
COPB1-208ENST00000532088 ANKRD12Q6UB98 2062 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 RP1P56715 2156 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 WFS1O76024 890 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 KCNK5O95279 499 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 FTH1P19P0C7X4 201 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 C1GALT1C1LP0DN25 315 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 EZRP15311 586 aaKnown RBP12.01□□□□□ -0.49
COPB1-208ENST00000532088 CDH3P22223 829 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 PSMB5P28074 263 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 GRK3P35626 688 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 HNF4AP41235 474 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 LSSP48449 732 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 PPM1FP49593 454 aaPredicted RBP12.01□□□□□ -0.49
COPB1-208ENST00000532088 NOVA1P51513 510 aaKnown RBP12.01□□□□□ -0.49
COPB1-208ENST00000532088 CCR8P51685 355 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 TSTA3Q13630 321 aaPredicted RBP12.01□□□□□ -0.49
COPB1-208ENST00000532088 RCN2Q14257 317 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 RSPO4Q2I0M5 234 aaPredicted RBP12.01□□□□□ -0.49
COPB1-208ENST00000532088 PAGE2BQ5JRK9 111 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 C10orf62Q5T681 223 aaPredicted RBP12.01□□□□□ -0.49
COPB1-208ENST00000532088 CACHD1Q5VU97 1274 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 KIAA1614Q5VZ46 1190 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 ATG16L1Q676U5 607 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 CYB5D1Q6P9G0 228 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 FIGLAQ6QHK4 219 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 ZNF574Q6ZN55 896 aaPredicted RBP12.01□□□□□ -0.49
COPB1-208ENST00000532088 SLCO4C1Q6ZQN7 724 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 PAQR7Q86WK9 346 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 FAM129CQ86XR2 697 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 ALDH16A1Q8IZ83 802 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 TBC1D19Q8N5T2 526 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 C19orf47Q8N9M1 422 aaKnown RBP12.01□□□□□ -0.49
COPB1-208ENST00000532088 PPP1R14CQ8TAE6 165 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 FAM76AQ8TAV0 307 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 UBE2E3Q969T4 207 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 PTCD3Q96EY7 689 aaKnown RBP12.01□□□□□ -0.49
COPB1-208ENST00000532088 MAP3K3Q99759 626 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 PAIP2Q9BPZ3 127 aaKnown RBP12.01□□□□□ -0.49
COPB1-208ENST00000532088 EFCAB11Q9BUY7 163 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 ACAT2Q9BWD1 397 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 IPPKQ9H8X2 491 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 EML4Q9HC35 981 aaKnown RBP12.01□□□□□ -0.49
COPB1-208ENST00000532088 SLC6A20Q9NP91 592 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 TRPS1Q9UHF7 1281 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 TSC22D4Q9Y3Q8 395 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 PCNX2A6NKB5 2137 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 ASXL3Q9C0F0 2248 aa12.01□□□□□ -0.49
COPB1-208ENST00000532088 FRYLO94915 3013 aa12□□□□□ -0.49
COPB1-208ENST00000532088 COL27A1Q8IZC6 1860 aaPredicted RBP12□□□□□ -0.49
COPB1-208ENST00000532088 KCNE1BA0A087WTH5 132 aa12□□□□□ -0.49
COPB1-208ENST00000532088 IGKV1-8A0A0C4DH67 115 aa12□□□□□ -0.49
COPB1-208ENST00000532088 IGHV5-10-1A0A0J9YXX1 117 aa12□□□□□ -0.49
COPB1-208ENST00000532088 LRRC14BA6NHZ5 514 aa12□□□□□ -0.49
COPB1-208ENST00000532088 E7EQ34 232 aa12□□□□□ -0.49
COPB1-208ENST00000532088 OR7A17O14581 309 aa12□□□□□ -0.49
COPB1-208ENST00000532088 GIPC1O14908 333 aa12□□□□□ -0.49
COPB1-208ENST00000532088 CLDN9O95484 217 aa12□□□□□ -0.49
COPB1-208ENST00000532088 CDH1P12830 882 aa12□□□□□ -0.49
COPB1-208ENST00000532088 ST6GAL1P15907 406 aa12□□□□□ -0.49
COPB1-208ENST00000532088 MAGP20916 626 aa12□□□□□ -0.49
COPB1-208ENST00000532088 SERPINB1P30740 379 aa12□□□□□ -0.49
COPB1-208ENST00000532088 CCNG1P51959 295 aa12□□□□□ -0.49
COPB1-208ENST00000532088 INHBCP55103 352 aa12□□□□□ -0.49
COPB1-208ENST00000532088 PPP1CAP62136 330 aa12□□□□□ -0.49
COPB1-208ENST00000532088 CSNK1G2P78368 415 aa12□□□□□ -0.49
COPB1-208ENST00000532088 HSD11B2P80365 405 aa12□□□□□ -0.49
COPB1-208ENST00000532088 SIM1P81133 766 aaPredicted RBP12□□□□□ -0.49
COPB1-208ENST00000532088 REEP5Q00765 189 aa12□□□□□ -0.49
COPB1-208ENST00000532088 IRF8Q02556 426 aa12□□□□□ -0.49
COPB1-208ENST00000532088 ZNF33BQ06732 778 aa12□□□□□ -0.49
COPB1-208ENST00000532088 TRAF3Q13114 568 aa12□□□□□ -0.49
COPB1-208ENST00000532088 CHI3L2Q15782 390 aa12□□□□□ -0.49
COPB1-208ENST00000532088 FBXO48Q5FWF7 155 aa12□□□□□ -0.49
COPB1-208ENST00000532088 ZC3H12BQ5HYM0 836 aaKnown RBP12□□□□□ -0.49
COPB1-208ENST00000532088 GRHL2Q6ISB3 625 aa12□□□□□ -0.49
COPB1-208ENST00000532088 RGS9BPQ6ZS82 235 aa12□□□□□ -0.49
COPB1-208ENST00000532088 FAM92BQ6ZTR7 304 aa12□□□□□ -0.49
COPB1-208ENST00000532088 RNF44Q7L0R7 432 aa12□□□□□ -0.49
COPB1-208ENST00000532088 TMPRSS9Q7Z410 1059 aa12□□□□□ -0.49
COPB1-208ENST00000532088 TMPRSS11BQ86T26 416 aa12□□□□□ -0.49
COPB1-208ENST00000532088 SLCO6A1Q86UG4 719 aa12□□□□□ -0.49
COPB1-208ENST00000532088 TMPRSS12Q86WS5 348 aa12□□□□□ -0.49
COPB1-208ENST00000532088 KRT78Q8N1N4 520 aa12□□□□□ -0.49
COPB1-208ENST00000532088 D2HGDHQ8N465 521 aa12□□□□□ -0.49
COPB1-208ENST00000532088 CCNYL1Q8N7R7 359 aa12□□□□□ -0.49
COPB1-208ENST00000532088 TTLQ8NG68 377 aa12□□□□□ -0.49
COPB1-208ENST00000532088 MDM1Q8TC05 714 aa12□□□□□ -0.49
COPB1-208ENST00000532088 MGARPQ8TDB4 240 aa12□□□□□ -0.49
COPB1-208ENST00000532088 ADAMTS14Q8WXS8 1223 aa12□□□□□ -0.49
COPB1-208ENST00000532088 NSUN5Q96P11 429 aaKnown RBP12□□□□□ -0.49
COPB1-208ENST00000532088 DEPDC7Q96QD5 511 aa12□□□□□ -0.49
COPB1-208ENST00000532088 AIF1LQ9BQI0 150 aa12□□□□□ -0.49
COPB1-208ENST00000532088 DPH7Q9BTV6 452 aa12□□□□□ -0.49
COPB1-208ENST00000532088 NOL11Q9H8H0 719 aaKnown RBP12□□□□□ -0.49
COPB1-208ENST00000532088 CUEDC1Q9NWM3 386 aaPredicted RBP12□□□□□ -0.49
COPB1-208ENST00000532088 TMEM9Q9P0T7 183 aa12□□□□□ -0.49
COPB1-208ENST00000532088 HAO1Q9UJM8 370 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms